PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD13G0008810 Rosmarinic Acid C4H low borderline
GbarD13G0008820 Rosmarinic Acid C4H low borderline
GbarD13G0008840 Rosmarinic Acid C4H low borderline
GbarD13G0009230 Rosmarinic Acid C4H low borderline
GbarD13G0009450 Rosmarinic Acid C4H low borderline
GbarD13G0009460 Rosmarinic Acid C4H low borderline
GbarD13G0013850 Rosmarinic Acid C4H low borderline
GbarD13G0015130 Rosmarinic Acid C4H medium pass
GbarD13G0015260 Rosmarinic Acid C4H medium pass
GbarD13G0015280 Rosmarinic Acid C4H low borderline
GbarD13G0015330 Rosmarinic Acid C4H low borderline
GbarD13G0017740 Rosmarinic Acid C4H low borderline
GbarD13G0017790 Rosmarinic Acid C4H low borderline
GbarD13G0017800 Rosmarinic Acid C4H low borderline
GbarD13G0022650 Rosmarinic Acid C4H medium pass
GbarD13G0022660 Rosmarinic Acid C4H medium pass
GbarD13G0026250 Rosmarinic Acid C4H medium pass
Gbarscaffold1817_obj_A060001490 Rosmarinic Acid C4H low borderline
Gbarscaffold6167_obj0006610 Rosmarinic Acid C4H medium pass
GbarA01G0012430 Rosmarinic Acid CPR medium pass
GbarA01G0024520 Rosmarinic Acid CPR medium pass
GbarA05G0000490 Rosmarinic Acid CPR medium pass
GbarA05G0021930 Rosmarinic Acid CPR medium pass
GbarA05G0038030 Rosmarinic Acid CPR medium pass
GbarA07G0012750 Rosmarinic Acid CPR medium pass
GbarA08G0002780 Rosmarinic Acid CPR medium pass
GbarA09G0018240 Rosmarinic Acid CPR medium pass
GbarD01G0013120 Rosmarinic Acid CPR medium pass
GbarD01G0025280 Rosmarinic Acid CPR medium pass
GbarD04G0012390 Rosmarinic Acid CPR medium pass
GbarD05G0000540 Rosmarinic Acid CPR medium pass
GbarD05G0022190 Rosmarinic Acid CPR medium pass
GbarD07G0012600 Rosmarinic Acid CPR medium pass
GbarD08G0002920 Rosmarinic Acid CPR medium pass
GbarD08G0011660 Rosmarinic Acid CPR medium pass
GbarD09G0017760 Rosmarinic Acid CPR medium pass
GbarD10G0015100 Rosmarinic Acid CPR medium pass
GbarD11G0001480 Rosmarinic Acid CPR medium pass
GbarD11G0013400 Rosmarinic Acid CPR medium pass
GbarA03G0002050 Rosmarinic Acid HPPR medium pass
GbarA03G0002060 Rosmarinic Acid HPPR medium pass
GbarA05G0013080 Rosmarinic Acid HPPR medium pass
GbarA07G0015750 Rosmarinic Acid HPPR medium pass
GbarA09G0010080 Rosmarinic Acid HPPR medium pass
GbarA12G0024400 Rosmarinic Acid HPPR medium pass
GbarD03G0017580 Rosmarinic Acid HPPR medium pass
GbarD03G0017590 Rosmarinic Acid HPPR medium pass
GbarD05G0013100 Rosmarinic Acid HPPR medium pass
GbarD07G0015840 Rosmarinic Acid HPPR medium pass
GbarD09G0009570 Rosmarinic Acid HPPR medium pass