PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD02G0010130 Rosmarinic Acid RAS low borderline
GbarD03G0000770 Rosmarinic Acid RAS low borderline
GbarD04G0007220 Rosmarinic Acid RAS low borderline
GbarD04G0010360 Rosmarinic Acid RAS low borderline
GbarD05G0005410 Rosmarinic Acid RAS medium pass
GbarD05G0005430 Rosmarinic Acid RAS medium pass
GbarD05G0005530 Rosmarinic Acid RAS medium pass
GbarD05G0009210 Rosmarinic Acid RAS low borderline
GbarD05G0011870 Rosmarinic Acid RAS medium pass
GbarD05G0018850 Rosmarinic Acid RAS low borderline
GbarD05G0025910 Rosmarinic Acid RAS low borderline
GbarD06G0000050 Rosmarinic Acid RAS low borderline
GbarD06G0000560 Rosmarinic Acid RAS low borderline
GbarD06G0001810 Rosmarinic Acid RAS low borderline
GbarD06G0001840 Rosmarinic Acid RAS low borderline
GbarD06G0006230 Rosmarinic Acid RAS medium pass
GbarD06G0006710 Rosmarinic Acid RAS low borderline
GbarD06G0015160 Rosmarinic Acid RAS low borderline
GbarD06G0022360 Rosmarinic Acid RAS medium pass
GbarD06G0022390 Rosmarinic Acid RAS medium pass
GbarD06G0022400 Rosmarinic Acid RAS medium pass
GbarD06G0022480 Rosmarinic Acid RAS medium pass
GbarD06G0022490 Rosmarinic Acid RAS medium pass
GbarD06G0022500 Rosmarinic Acid RAS medium pass
GbarD06G0022510 Rosmarinic Acid RAS medium pass
GbarD06G0023270 Rosmarinic Acid RAS low borderline
GbarD08G0006270 Rosmarinic Acid RAS low borderline
GbarD08G0016770 Rosmarinic Acid RAS low borderline
GbarD10G0003210 Rosmarinic Acid RAS low borderline
GbarD10G0012940 Rosmarinic Acid RAS medium pass
GbarD10G0012950 Rosmarinic Acid RAS medium pass
GbarD10G0013020 Rosmarinic Acid RAS medium pass
GbarD10G0013050 Rosmarinic Acid RAS medium pass
GbarD10G0027530 Rosmarinic Acid RAS medium pass
GbarD11G0011140 Rosmarinic Acid RAS low borderline
GbarD12G0003430 Rosmarinic Acid RAS low borderline
GbarD12G0029900 Rosmarinic Acid RAS low borderline
GbarD13G0011710 Rosmarinic Acid RAS medium pass
Gbarscaffold27529_obj0003090 Rosmarinic Acid RAS medium pass
Gbarscaffold47554_obj0005580 Rosmarinic Acid RAS medium pass
Gbarscaffold582_subseq_6997805_7036964_obj_D030006400 Rosmarinic Acid RAS medium pass
Gbarscaffold8503_obj0007530 Rosmarinic Acid RAS medium pass
GbarA01G0010330 Rosmarinic Acid TAT medium pass
GbarA01G0010350 Rosmarinic Acid TAT medium pass
GbarA03G0015040 Rosmarinic Acid TAT medium pass
GbarA03G0015060 Rosmarinic Acid TAT medium pass
GbarA03G0017790 Rosmarinic Acid TAT medium pass
GbarA03G0017800 Rosmarinic Acid TAT medium pass
GbarA04G0010810 Rosmarinic Acid TAT low borderline
GbarA04G0016690 Rosmarinic Acid TAT medium pass