PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD06G0003640 Steroid ROT3/CYP90C1 low borderline
GbarD06G0018550 Steroid ROT3/CYP90C1 medium borderline
GbarD07G0008790 Steroid ROT3/CYP90C1 medium borderline
GbarD09G0002260 Steroid ROT3/CYP90C1 low borderline
GbarD09G0020850 Steroid ROT3/CYP90C1 low borderline
GbarD10G0000610 Steroid ROT3/CYP90C1 low borderline
GbarD10G0015390 Steroid ROT3/CYP90C1 medium borderline
GbarD11G0019150 Steroid ROT3/CYP90C1 medium borderline
GbarD12G0024700 Steroid ROT3/CYP90C1 medium borderline
GbarD13G0001260 Steroid ROT3/CYP90C1 medium borderline
GbarD13G0006490 Steroid ROT3/CYP90C1 medium borderline
Gbarscaffold297_obj_D090003260 Steroid ROT3/CYP90C1 low borderline
Gbarscaffold297_obj_D090003280 Steroid ROT3/CYP90C1 low borderline
GbarA03G0005750 Steroid SMO1/SMO2 medium pass
GbarA04G0017740 Steroid SMO1/SMO2 low borderline
GbarA08G0019970 Steroid SMO1/SMO2 medium pass
GbarA09G0021070 Steroid SMO1/SMO2 medium pass
GbarA12G0012000 Steroid SMO1/SMO2 medium pass
GbarA12G0024210 Steroid SMO1/SMO2 medium pass
GbarA13G0025380 Steroid SMO1/SMO2 medium pass
GbarD03G0013910 Steroid SMO1/SMO2 medium pass
GbarD04G0021210 Steroid SMO1/SMO2 low borderline
GbarD08G0020170 Steroid SMO1/SMO2 medium pass
GbarD09G0020430 Steroid SMO1/SMO2 medium pass
GbarD12G0012050 Steroid SMO1/SMO2 medium pass
GbarD12G0012060 Steroid SMO1/SMO2 medium pass
GbarD12G0024310 Steroid SMO1/SMO2 medium pass
GbarD13G0025340 Steroid SMO1/SMO2 medium pass
GbarA01G0005930 Steroid SMT1/SMT2/SMT3 low borderline
GbarA01G0005940 Steroid SMT1/SMT2/SMT3 low borderline
GbarA02G0003530 Steroid SMT1/SMT2/SMT3 medium pass
GbarA02G0013610 Steroid SMT1/SMT2/SMT3 medium pass
GbarA03G0003960 Steroid SMT1/SMT2/SMT3 low borderline
GbarA03G0010750 Steroid SMT1/SMT2/SMT3 low borderline
GbarA03G0011710 Steroid SMT1/SMT2/SMT3 low borderline
GbarA03G0014220 Steroid SMT1/SMT2/SMT3 low borderline
GbarA03G0016810 Steroid SMT1/SMT2/SMT3 medium pass
GbarA03G0017450 Steroid SMT1/SMT2/SMT3 medium pass
GbarA04G0000480 Steroid SMT1/SMT2/SMT3 low borderline
GbarA04G0000850 Steroid SMT1/SMT2/SMT3 low borderline
GbarA04G0002000 Steroid SMT1/SMT2/SMT3 low borderline
GbarA04G0002010 Steroid SMT1/SMT2/SMT3 low borderline
GbarA04G0004330 Steroid SMT1/SMT2/SMT3 low borderline
GbarA04G0007010 Steroid SMT1/SMT2/SMT3 medium pass
GbarA04G0012920 Steroid SMT1/SMT2/SMT3 low borderline
GbarA04G0012930 Steroid SMT1/SMT2/SMT3 low borderline
GbarA04G0017110 Steroid SMT1/SMT2/SMT3 low borderline
GbarA05G0018260 Steroid SMT1/SMT2/SMT3 medium pass
GbarA05G0020070 Steroid SMT1/SMT2/SMT3 medium pass
GbarA05G0021160 Steroid SMT1/SMT2/SMT3 medium pass