PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
GbarA13G0026070 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GbarD01G0002290 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GbarD01G0002300 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GbarD01G0010910 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
GbarD01G0018540 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GbarD01G0020650 Phenylpropanoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
GbarD02G0005750 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD02G0005760 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD02G0010190 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
GbarD02G0010260 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD02G0010300 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD02G0016310 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
GbarD03G0000290 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD03G0000330 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD03G0005250 Phenylpropanoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
GbarD03G0007070 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD03G0007200 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD03G0009380 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GbarD03G0015710 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GbarD03G0019530 Phenylpropanoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
GbarD04G0000740 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GbarD04G0001180 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
GbarD04G0018640 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD05G0000560 Phenylpropanoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
GbarD05G0011110 Phenylpropanoid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
GbarD05G0014560 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
GbarD05G0023690 Phenylpropanoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
GbarD05G0034520 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
GbarD06G0004580 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GbarD06G0021180 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
GbarD07G0005970 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GbarD07G0009580 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
GbarD07G0013940 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
GbarD08G0004420 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD08G0018020 Phenylpropanoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
GbarD08G0020870 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GbarD09G0006780 Phenylpropanoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
GbarD09G0007830 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD09G0015800 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GbarD09G0021340 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD09G0025980 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GbarD10G0005250 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
GbarD10G0007300 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
GbarD10G0014900 Phenylpropanoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
GbarD10G0015610 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD10G0019620 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD11G0002430 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
GbarD11G0004030 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
GbarD11G0018140 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
GbarD11G0033840 Phenylpropanoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY