PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD11G0013110 Alkaloid GES low borderline
GbarD11G0028520 Alkaloid GES medium pass
GbarD11G0031730 Alkaloid GES medium pass
GbarD11G0031750 Alkaloid GES medium pass
GbarD11G0031760 Alkaloid GES medium pass
GbarD11G0031770 Alkaloid GES medium pass
GbarD11G0031780 Alkaloid GES medium pass
GbarD11G0031820 Alkaloid GES medium pass
GbarD11G0031830 Alkaloid GES medium pass
GbarD11G0034050 Alkaloid GES medium pass
GbarD13G0013920 Alkaloid GES medium pass
GbarD13G0013950 Alkaloid GES medium pass
GbarD13G0013960 Alkaloid GES medium pass
GbarD13G0016250 Alkaloid GES medium pass
GbarD13G0016260 Alkaloid GES medium pass
Gbarscaffold3079_obj_A100003430 Alkaloid GES medium pass
GbarA01G0005610 Alkaloid GS low borderline
GbarA01G0022860 Alkaloid GS low borderline
GbarA02G0016280 Alkaloid GS high pass
GbarA02G0017130 Alkaloid GS high pass
GbarA03G0004620 Alkaloid GS low borderline
GbarA03G0016090 Alkaloid GS low borderline
GbarA03G0021000 Alkaloid GS high pass
GbarA05G0016530 Alkaloid GS low borderline
GbarA05G0018400 Alkaloid GS high pass
GbarA05G0027890 Alkaloid GS low borderline
GbarA05G0037830 Alkaloid GS low borderline
GbarA06G0008650 Alkaloid GS low borderline
GbarA07G0004890 Alkaloid GS low borderline
GbarA07G0004900 Alkaloid GS low borderline
GbarA07G0010110 Alkaloid GS low borderline
GbarA07G0010120 Alkaloid GS low borderline
GbarA07G0010130 Alkaloid GS low borderline
GbarA07G0010140 Alkaloid GS low borderline
GbarA07G0010150 Alkaloid GS low borderline
GbarA07G0010160 Alkaloid GS low borderline
GbarA07G0022480 Alkaloid GS low borderline
GbarA07G0024880 Alkaloid GS low borderline
GbarA07G0024930 Alkaloid GS low borderline
GbarA09G0003020 Alkaloid GS low borderline
GbarA09G0005540 Alkaloid GS medium pass
GbarA10G0002130 Alkaloid GS low borderline
GbarA10G0015280 Alkaloid GS low borderline
GbarA10G0016870 Alkaloid GS medium pass
GbarA11G0021920 Alkaloid GS high pass
GbarA11G0021930 Alkaloid GS high pass
GbarA11G0021950 Alkaloid GS high pass
GbarA11G0023440 Alkaloid GS high pass
GbarA12G0002040 Alkaloid GS high pass
GbarA12G0009900 Alkaloid GS high pass