PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA04G0015570 Steroid SQE medium pass
GbarA05G0021310 Steroid SQE medium pass
GbarA06G0002680 Steroid SQE medium pass
GbarA11G0022480 Steroid SQE medium pass
GbarD01G0012890 Steroid SQE medium pass
GbarD01G0020410 Steroid SQE medium pass
GbarD02G0025450 Steroid SQE medium pass
GbarD03G0003090 Steroid SQE medium pass
GbarD04G0018930 Steroid SQE medium pass
GbarD04G0018940 Steroid SQE medium pass
GbarD04G0018950 Steroid SQE medium pass
GbarD04G0018960 Steroid SQE medium pass
GbarD05G0021620 Steroid SQE medium pass
GbarD06G0002520 Steroid SQE medium pass
GbarD11G0021970 Steroid SQE medium pass
Gbarscaffold4874_obj0005770 Steroid SQE medium pass
Gbarscaffold7085_obj0007120 Steroid SQE medium pass
GbarA01G0000380 Steroid SQS/FDFT1 high pass
GbarA03G0001540 Steroid SQS/FDFT1 low borderline
GbarA03G0022300 Steroid SQS/FDFT1 high pass
GbarA05G0040130 Steroid SQS/FDFT1 medium pass
GbarA06G0011230 Steroid SQS/FDFT1 medium pass
GbarA07G0008150 Steroid SQS/FDFT1 medium pass
GbarA09G0000880 Steroid SQS/FDFT1 medium pass
GbarA12G0010180 Steroid SQS/FDFT1 low borderline
GbarD01G0000380 Steroid SQS/FDFT1 high pass
GbarD02G0024000 Steroid SQS/FDFT1 high pass
GbarD03G0018090 Steroid SQS/FDFT1 low borderline
GbarD04G0003610 Steroid SQS/FDFT1 medium pass
GbarD05G0032820 Steroid SQS/FDFT1 low borderline
GbarD06G0012190 Steroid SQS/FDFT1 medium pass
GbarD07G0008170 Steroid SQS/FDFT1 medium pass
GbarD09G0000920 Steroid SQS/FDFT1 medium pass
GbarD11G0024690 Steroid SQS/FDFT1 low borderline