PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD11G0019570 Flavonoid IFS low borderline
GbarD11G0020030 Flavonoid IFS medium borderline
GbarD11G0021180 Flavonoid IFS medium borderline
GbarD11G0023030 Flavonoid IFS low borderline
GbarD11G0034560 Flavonoid IFS low borderline
GbarD11G0034570 Flavonoid IFS low borderline
GbarD12G0004320 Flavonoid IFS medium borderline
GbarD12G0005820 Flavonoid IFS medium borderline
GbarD12G0009690 Flavonoid IFS medium borderline
GbarD12G0015830 Flavonoid IFS low borderline
GbarD12G0016570 Flavonoid IFS medium borderline
GbarD12G0017890 Flavonoid IFS low borderline
GbarD12G0018300 Flavonoid IFS low borderline
GbarD12G0020100 Flavonoid IFS medium borderline
GbarD12G0020490 Flavonoid IFS medium borderline
GbarD12G0022300 Flavonoid IFS low borderline
GbarD12G0022630 Flavonoid IFS medium borderline
GbarD12G0022640 Flavonoid IFS medium borderline
GbarD12G0024230 Flavonoid IFS medium borderline
GbarD12G0024700 Flavonoid IFS low borderline
GbarD12G0025040 Flavonoid IFS low borderline
GbarD12G0028720 Flavonoid IFS medium borderline
GbarD13G0002320 Flavonoid IFS medium borderline
GbarD13G0002960 Flavonoid IFS medium borderline
GbarD13G0003700 Flavonoid IFS low borderline
GbarD13G0003940 Flavonoid IFS low borderline
GbarD13G0008820 Flavonoid IFS low borderline
GbarD13G0009230 Flavonoid IFS low borderline
GbarD13G0009460 Flavonoid IFS low borderline
GbarD13G0009480 Flavonoid IFS medium borderline
GbarD13G0013310 Flavonoid IFS low borderline
GbarD13G0013450 Flavonoid IFS low borderline
GbarD13G0013850 Flavonoid IFS medium borderline
GbarD13G0015260 Flavonoid IFS medium borderline
GbarD13G0015330 Flavonoid IFS medium borderline
GbarD13G0017800 Flavonoid IFS medium borderline
GbarD13G0022650 Flavonoid IFS medium borderline
GbarD13G0022660 Flavonoid IFS medium borderline
Gbarscaffold17368_obj_A060001410 Flavonoid IFS low borderline
Gbarscaffold6167_obj0006610 Flavonoid IFS medium borderline
GbarA01G0023160 Flavonoid PAL high pass
GbarA04G0009180 Flavonoid PAL high pass
GbarA06G0008140 Flavonoid PAL high pass
GbarA09G0016630 Flavonoid PAL high pass
GbarA10G0022580 Flavonoid PAL high pass
GbarA11G0037000 Flavonoid PAL high pass
GbarD01G0023950 Flavonoid PAL high pass
GbarD04G0012470 Flavonoid PAL high pass
GbarD04G0012480 Flavonoid PAL high pass
GbarD06G0007910 Flavonoid PAL high pass