PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD08G0002990 Alkaloid NMT low borderline
GbarD08G0006080 Alkaloid NMT medium borderline
GbarD08G0010350 Alkaloid NMT medium pass
GbarD08G0019110 Alkaloid NMT low borderline
GbarD08G0020970 Alkaloid NMT low borderline
GbarD08G0022000 Alkaloid NMT medium pass
GbarD08G0024760 Alkaloid NMT medium pass
GbarD08G0024770 Alkaloid NMT medium borderline
GbarD09G0004070 Alkaloid NMT medium pass
GbarD09G0007560 Alkaloid NMT medium pass
GbarD09G0010140 Alkaloid NMT low borderline
GbarD09G0024250 Alkaloid NMT medium borderline
GbarD09G0024520 Alkaloid NMT medium pass
GbarD09G0025240 Alkaloid NMT medium pass
GbarD10G0000660 Alkaloid NMT low borderline
GbarD10G0009940 Alkaloid NMT medium borderline
GbarD10G0010450 Alkaloid NMT medium pass
GbarD10G0014140 Alkaloid NMT medium pass
GbarD10G0018890 Alkaloid NMT medium pass
GbarD10G0022770 Alkaloid NMT medium pass
GbarD11G0010640 Alkaloid NMT medium pass
GbarD11G0014230 Alkaloid NMT medium pass
GbarD11G0016130 Alkaloid NMT medium pass
GbarD11G0020710 Alkaloid NMT medium pass
GbarD11G0024730 Alkaloid NMT medium pass
GbarD11G0025830 Alkaloid NMT low borderline
GbarD11G0025980 Alkaloid NMT medium pass
GbarD11G0034900 Alkaloid NMT medium pass
GbarD12G0006480 Alkaloid NMT medium borderline
GbarD12G0013010 Alkaloid NMT low borderline
GbarD12G0013570 Alkaloid NMT medium borderline
GbarD12G0014290 Alkaloid NMT medium pass
GbarD12G0017070 Alkaloid NMT low borderline
GbarD12G0021380 Alkaloid NMT low borderline
GbarD12G0023540 Alkaloid NMT medium pass
GbarD12G0026380 Alkaloid NMT medium borderline
GbarD12G0026780 Alkaloid NMT medium pass
GbarD12G0027250 Alkaloid NMT low borderline
GbarD12G0029180 Alkaloid NMT medium borderline
GbarD13G0000350 Alkaloid NMT medium pass
GbarD13G0006100 Alkaloid NMT medium pass
GbarD13G0011650 Alkaloid NMT medium pass
GbarD13G0018010 Alkaloid NMT medium borderline
GbarD13G0023380 Alkaloid NMT low borderline
GbarD13G0024120 Alkaloid NMT medium borderline
GbarA03G0005760 Alkaloid ODC low borderline
GbarA11G0028600 Alkaloid ODC medium pass
GbarA11G0028620 Alkaloid ODC medium pass
GbarD11G0028890 Alkaloid ODC medium pass
GbarD11G0028900 Alkaloid ODC medium pass