PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD11G0034780 Alkaloid SGD medium pass
GbarD12G0027420 Alkaloid SGD medium pass
GbarD12G0027500 Alkaloid SGD medium pass
GbarD13G0008400 Alkaloid SGD medium pass
GbarD13G0008410 Alkaloid SGD medium pass
GbarD13G0008420 Alkaloid SGD medium pass
GbarD13G0016290 Alkaloid SGD medium pass
GbarD13G0016550 Alkaloid SGD medium pass
GbarA01G0003970 Alkaloid SLS medium borderline
GbarA05G0001930 Alkaloid SLS medium borderline
GbarA05G0003310 Alkaloid SLS medium borderline
GbarA06G0006270 Alkaloid SLS medium borderline
GbarA07G0000230 Alkaloid SLS medium borderline
GbarA07G0004590 Alkaloid SLS medium borderline
GbarA07G0020500 Alkaloid SLS medium borderline
GbarA08G0027290 Alkaloid SLS medium borderline
GbarA09G0003300 Alkaloid SLS low borderline
GbarA10G0000550 Alkaloid SLS medium borderline
GbarA10G0021820 Alkaloid SLS medium borderline
GbarA11G0008490 Alkaloid SLS medium borderline
GbarA11G0008500 Alkaloid SLS medium borderline
GbarA11G0016140 Alkaloid SLS medium borderline
GbarA12G0015810 Alkaloid SLS medium borderline
GbarA13G0003780 Alkaloid SLS medium borderline
GbarA13G0006080 Alkaloid SLS medium pass
GbarA13G0006120 Alkaloid SLS medium pass
GbarA13G0010960 Alkaloid SLS medium borderline
GbarD01G0003910 Alkaloid SLS medium borderline
GbarD02G0002400 Alkaloid SLS medium borderline
GbarD05G0001960 Alkaloid SLS medium borderline
GbarD05G0003380 Alkaloid SLS medium borderline
GbarD05G0009670 Alkaloid SLS medium borderline
GbarD05G0019920 Alkaloid SLS medium borderline
GbarD06G0006000 Alkaloid SLS medium borderline
GbarD07G0000310 Alkaloid SLS medium borderline
GbarD07G0004620 Alkaloid SLS medium borderline
GbarD07G0020400 Alkaloid SLS medium borderline
GbarD07G0020680 Alkaloid SLS medium borderline
GbarD08G0019630 Alkaloid SLS medium borderline
GbarD08G0027260 Alkaloid SLS medium borderline
GbarD10G0022790 Alkaloid SLS medium borderline
GbarD11G0008870 Alkaloid SLS medium borderline
GbarD11G0016470 Alkaloid SLS medium borderline
GbarD12G0015830 Alkaloid SLS medium borderline
GbarD13G0009230 Alkaloid SLS medium borderline
GbarA01G0005260 Alkaloid STR low borderline
GbarA01G0006430 Alkaloid STR low borderline
GbarA01G0012920 Alkaloid STR low borderline
GbarA01G0013500 Alkaloid STR low borderline
GbarA01G0014350 Alkaloid STR low borderline