PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD04G0002050 Alkaloid T3O low borderline
GbarD04G0002250 Alkaloid T3O medium pass
GbarD04G0003850 Alkaloid T3O medium pass
GbarD04G0006120 Alkaloid T3O medium pass
GbarD04G0007980 Alkaloid T3O low borderline
GbarD04G0016380 Alkaloid T3O medium pass
GbarD04G0019090 Alkaloid T3O medium borderline
GbarD04G0019100 Alkaloid T3O medium borderline
GbarD04G0019140 Alkaloid T3O medium borderline
GbarD04G0019220 Alkaloid T3O medium borderline
GbarD05G0008930 Alkaloid T3O low borderline
GbarD05G0015230 Alkaloid T3O low borderline
GbarD05G0019160 Alkaloid T3O medium borderline
GbarD05G0020160 Alkaloid T3O medium borderline
GbarD05G0020170 Alkaloid T3O medium borderline
GbarD05G0020180 Alkaloid T3O medium borderline
GbarD05G0020190 Alkaloid T3O medium borderline
GbarD05G0021080 Alkaloid T3O medium borderline
GbarD05G0026410 Alkaloid T3O medium borderline
GbarD05G0029810 Alkaloid T3O medium borderline
GbarD05G0032160 Alkaloid T3O medium borderline
GbarD05G0035290 Alkaloid T3O medium borderline
GbarD05G0035310 Alkaloid T3O medium borderline
GbarD05G0038710 Alkaloid T3O medium borderline
GbarD06G0000610 Alkaloid T3O medium pass
GbarD06G0001120 Alkaloid T3O low borderline
GbarD06G0001190 Alkaloid T3O medium borderline
GbarD06G0001220 Alkaloid T3O medium borderline
GbarD06G0001230 Alkaloid T3O medium borderline
GbarD06G0001250 Alkaloid T3O medium borderline
GbarD06G0002110 Alkaloid T3O medium borderline
GbarD06G0008200 Alkaloid T3O medium borderline
GbarD06G0012530 Alkaloid T3O medium borderline
GbarD06G0016130 Alkaloid T3O low borderline
GbarD06G0018550 Alkaloid T3O medium pass
GbarD06G0019160 Alkaloid T3O medium pass
GbarD06G0020740 Alkaloid T3O low borderline
GbarD07G0005790 Alkaloid T3O medium pass
GbarD07G0006230 Alkaloid T3O medium borderline
GbarD07G0006260 Alkaloid T3O medium borderline
GbarD07G0008650 Alkaloid T3O medium borderline
GbarD07G0008660 Alkaloid T3O medium borderline
GbarD07G0008790 Alkaloid T3O medium pass
GbarD07G0010760 Alkaloid T3O medium pass
GbarD07G0017260 Alkaloid T3O medium borderline
GbarD07G0019970 Alkaloid T3O medium pass
GbarD07G0022730 Alkaloid T3O medium borderline
GbarD07G0023210 Alkaloid T3O low borderline
GbarD08G0000860 Alkaloid T3O medium pass
GbarD08G0001390 Alkaloid T3O low borderline