PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD01G0022370 Alkaloid TDC low borderline
GbarD05G0000840 Alkaloid TDC low borderline
GbarD05G0024460 Alkaloid TDC low borderline
GbarD10G0020840 Alkaloid TDC medium borderline
GbarA01G0000710 Alkaloid TRI/TRII low borderline
GbarA01G0000720 Alkaloid TRI/TRII low borderline
GbarA01G0015310 Alkaloid TRI/TRII medium pass
GbarA01G0022080 Alkaloid TRI/TRII medium pass
GbarA01G0022090 Alkaloid TRI/TRII medium pass
GbarA01G0022100 Alkaloid TRI/TRII medium pass
GbarA01G0022110 Alkaloid TRI/TRII medium pass
GbarA01G0022120 Alkaloid TRI/TRII medium pass
GbarA01G0024940 Alkaloid TRI/TRII medium pass
GbarA03G0022790 Alkaloid TRI/TRII low borderline
GbarA04G0005640 Alkaloid TRI/TRII low borderline
GbarA04G0009980 Alkaloid TRI/TRII low borderline
GbarA05G0009340 Alkaloid TRI/TRII medium pass
GbarA05G0009350 Alkaloid TRI/TRII medium pass
GbarA05G0011020 Alkaloid TRI/TRII medium pass
GbarA05G0017420 Alkaloid TRI/TRII medium pass
GbarA05G0032100 Alkaloid TRI/TRII medium pass
GbarA05G0036730 Alkaloid TRI/TRII medium pass
GbarA07G0007320 Alkaloid TRI/TRII medium pass
GbarA07G0014150 Alkaloid TRI/TRII medium pass
GbarA07G0015520 Alkaloid TRI/TRII low borderline
GbarA07G0026290 Alkaloid TRI/TRII medium pass
GbarA08G0007780 Alkaloid TRI/TRII medium pass
GbarA08G0023800 Alkaloid TRI/TRII medium pass
GbarA09G0004550 Alkaloid TRI/TRII medium pass
GbarA09G0015260 Alkaloid TRI/TRII medium pass
GbarA09G0015280 Alkaloid TRI/TRII medium pass
GbarA09G0015880 Alkaloid TRI/TRII medium pass
GbarA09G0015890 Alkaloid TRI/TRII medium pass
GbarA09G0015900 Alkaloid TRI/TRII medium pass
GbarA09G0015910 Alkaloid TRI/TRII medium pass
GbarA09G0015920 Alkaloid TRI/TRII medium pass
GbarA09G0017070 Alkaloid TRI/TRII medium pass
GbarA09G0017430 Alkaloid TRI/TRII low borderline
GbarA10G0000920 Alkaloid TRI/TRII medium pass
GbarA10G0000930 Alkaloid TRI/TRII medium pass
GbarA10G0021240 Alkaloid TRI/TRII low borderline
GbarA11G0003160 Alkaloid TRI/TRII medium pass
GbarA11G0003170 Alkaloid TRI/TRII medium pass
GbarA11G0003180 Alkaloid TRI/TRII medium pass
GbarA11G0008950 Alkaloid TRI/TRII low borderline
GbarA11G0011120 Alkaloid TRI/TRII medium pass
GbarA11G0012350 Alkaloid TRI/TRII medium pass
GbarA11G0028970 Alkaloid TRI/TRII low borderline
GbarA11G0028980 Alkaloid TRI/TRII medium pass
GbarA11G0036380 Alkaloid TRI/TRII medium pass