PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA01G0022470 Alkaloid 7DLH medium borderline
GbarA02G0002470 Alkaloid 7DLH medium borderline
GbarA02G0002480 Alkaloid 7DLH medium borderline
GbarA02G0002490 Alkaloid 7DLH medium borderline
GbarA02G0002500 Alkaloid 7DLH medium borderline
GbarA02G0002530 Alkaloid 7DLH medium borderline
GbarA02G0002540 Alkaloid 7DLH medium borderline
GbarA02G0002550 Alkaloid 7DLH medium borderline
GbarA02G0002560 Alkaloid 7DLH medium borderline
GbarA02G0002570 Alkaloid 7DLH medium borderline
GbarA02G0007000 Alkaloid 7DLH low borderline
GbarA03G0006170 Alkaloid 7DLH medium borderline
GbarA04G0007550 Alkaloid 7DLH medium borderline
GbarA04G0017450 Alkaloid 7DLH medium borderline
GbarA04G0017460 Alkaloid 7DLH medium borderline
GbarA05G0006460 Alkaloid 7DLH medium borderline
GbarA05G0009810 Alkaloid 7DLH medium borderline
GbarA05G0019520 Alkaloid 7DLH medium borderline
GbarA05G0019530 Alkaloid 7DLH medium borderline
GbarA07G0011290 Alkaloid 7DLH medium borderline
GbarA07G0020120 Alkaloid 7DLH medium borderline
GbarA08G0015790 Alkaloid 7DLH medium borderline
GbarA08G0020950 Alkaloid 7DLH medium borderline
GbarA08G0026630 Alkaloid 7DLH medium borderline
GbarA09G0005150 Alkaloid 7DLH medium borderline
GbarA09G0019640 Alkaloid 7DLH medium borderline
GbarA10G0013480 Alkaloid 7DLH medium borderline
GbarA11G0017000 Alkaloid 7DLH medium borderline
GbarA11G0036870 Alkaloid 7DLH medium borderline
GbarA12G0005340 Alkaloid 7DLH medium borderline
GbarA12G0011470 Alkaloid 7DLH medium borderline
GbarA12G0024910 Alkaloid 7DLH medium borderline
GbarA13G0003790 Alkaloid 7DLH medium borderline
GbarA13G0006110 Alkaloid 7DLH medium borderline
GbarA13G0009250 Alkaloid 7DLH medium borderline
GbarD01G0003900 Alkaloid 7DLH medium borderline
GbarD01G0008630 Alkaloid 7DLH low borderline
GbarD01G0012080 Alkaloid 7DLH medium borderline
GbarD01G0023290 Alkaloid 7DLH medium borderline
GbarD02G0002720 Alkaloid 7DLH medium borderline
GbarD02G0002730 Alkaloid 7DLH medium borderline
GbarD02G0002740 Alkaloid 7DLH medium borderline
GbarD02G0002750 Alkaloid 7DLH medium borderline
GbarD02G0002760 Alkaloid 7DLH medium borderline
GbarD02G0002770 Alkaloid 7DLH medium borderline
GbarD02G0002780 Alkaloid 7DLH medium borderline
GbarD02G0002790 Alkaloid 7DLH medium borderline
GbarD02G0002800 Alkaloid 7DLH medium borderline
GbarD02G0002810 Alkaloid 7DLH medium borderline
GbarD03G0013370 Alkaloid 7DLH medium borderline