PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA05G0006460 Flavonoid F3'H/CYP75B low borderline
GbarA05G0011040 Flavonoid F3'H/CYP75B medium borderline
GbarA05G0019770 Flavonoid F3'H/CYP75B medium borderline
GbarA05G0031940 Flavonoid F3'H/CYP75B medium borderline
GbarA05G0035490 Flavonoid F3'H/CYP75B low borderline
GbarA05G0041570 Flavonoid F3'H/CYP75B low borderline
GbarA05G0041730 Flavonoid F3'H/CYP75B low borderline
GbarA05G0042530 Flavonoid F3'H/CYP75B low borderline
GbarA06G0001340 Flavonoid F3'H/CYP75B medium borderline
GbarA06G0006270 Flavonoid F3'H/CYP75B low borderline
GbarA06G0012840 Flavonoid F3'H/CYP75B medium borderline
GbarA07G0006270 Flavonoid F3'H/CYP75B medium borderline
GbarA07G0008650 Flavonoid F3'H/CYP75B low borderline
GbarA07G0017300 Flavonoid F3'H/CYP75B medium borderline
GbarA07G0021930 Flavonoid F3'H/CYP75B medium borderline
GbarA07G0023130 Flavonoid F3'H/CYP75B low borderline
GbarA07G0023780 Flavonoid F3'H/CYP75B low borderline
GbarA07G0023790 Flavonoid F3'H/CYP75B low borderline
GbarA08G0014910 Flavonoid F3'H/CYP75B medium borderline
GbarA08G0019820 Flavonoid F3'H/CYP75B medium borderline
GbarA08G0020180 Flavonoid F3'H/CYP75B medium borderline
GbarA08G0021520 Flavonoid F3'H/CYP75B low borderline
GbarA08G0026630 Flavonoid F3'H/CYP75B low borderline
GbarA08G0027290 Flavonoid F3'H/CYP75B low borderline
GbarA09G0001870 Flavonoid F3'H/CYP75B medium borderline
GbarA09G0006460 Flavonoid F3'H/CYP75B medium borderline
GbarA09G0006470 Flavonoid F3'H/CYP75B medium borderline
GbarA09G0014220 Flavonoid F3'H/CYP75B medium borderline
GbarA09G0019640 Flavonoid F3'H/CYP75B low borderline
GbarA09G0020950 Flavonoid F3'H/CYP75B medium borderline
GbarA09G0020960 Flavonoid F3'H/CYP75B medium borderline
GbarA09G0020980 Flavonoid F3'H/CYP75B medium borderline
GbarA10G0013480 Flavonoid F3'H/CYP75B low borderline
GbarA10G0013520 Flavonoid F3'H/CYP75B medium borderline
GbarA10G0021150 Flavonoid F3'H/CYP75B medium borderline
GbarA10G0021860 Flavonoid F3'H/CYP75B medium borderline
GbarA11G0000720 Flavonoid F3'H/CYP75B medium borderline
GbarA11G0000730 Flavonoid F3'H/CYP75B medium borderline
GbarA11G0000750 Flavonoid F3'H/CYP75B medium borderline
GbarA11G0017000 Flavonoid F3'H/CYP75B low borderline
GbarA11G0020660 Flavonoid F3'H/CYP75B medium borderline
GbarA11G0023330 Flavonoid F3'H/CYP75B medium pass
GbarA11G0023560 Flavonoid F3'H/CYP75B medium borderline
GbarA11G0024780 Flavonoid F3'H/CYP75B medium borderline
GbarA11G0036870 Flavonoid F3'H/CYP75B low borderline
GbarA12G0002400 Flavonoid F3'H/CYP75B low borderline
GbarA12G0002790 Flavonoid F3'H/CYP75B medium borderline
GbarA12G0005340 Flavonoid F3'H/CYP75B low borderline
GbarA12G0006290 Flavonoid F3'H/CYP75B medium borderline
GbarA12G0009650 Flavonoid F3'H/CYP75B medium borderline