PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
LchiScaffold1000001470 Alkaloid 7DLGT low borderline
LchiScaffold1000001480 Alkaloid 7DLGT medium pass
LchiScaffold1000001500 Alkaloid 7DLGT low borderline
LchiScaffold1000001520 Alkaloid 7DLGT low borderline
LchiScaffold10390007250 Alkaloid 7DLGT medium pass
LchiScaffold11310019140 Alkaloid 7DLGT high pass
LchiScaffold11310019150 Alkaloid 7DLGT high pass
LchiScaffold11340020010 Alkaloid 7DLGT medium pass
LchiScaffold11340020050 Alkaloid 7DLGT medium pass
LchiScaffold11340020080 Alkaloid 7DLGT medium pass
LchiScaffold11340020120 Alkaloid 7DLGT medium pass
LchiScaffold11340020170 Alkaloid 7DLGT high pass
LchiScaffold11340020190 Alkaloid 7DLGT medium pass
LchiScaffold11340020210 Alkaloid 7DLGT medium pass
LchiScaffold11340020260 Alkaloid 7DLGT medium pass
LchiScaffold11340020280 Alkaloid 7DLGT medium pass
LchiScaffold11340020350 Alkaloid 7DLGT high pass
LchiScaffold11490021820 Alkaloid 7DLGT medium pass
LchiScaffold11490021840 Alkaloid 7DLGT medium pass
LchiScaffold11490021860 Alkaloid 7DLGT low borderline
LchiScaffold11520022850 Alkaloid 7DLGT low borderline
LchiScaffold11520022860 Alkaloid 7DLGT low borderline
LchiScaffold11520022880 Alkaloid 7DLGT low borderline
LchiScaffold11520022890 Alkaloid 7DLGT low borderline
LchiScaffold11520022900 Alkaloid 7DLGT low borderline
LchiScaffold11520022910 Alkaloid 7DLGT low borderline
LchiScaffold11560023840 Alkaloid 7DLGT low borderline
LchiScaffold11560023890 Alkaloid 7DLGT low borderline
LchiScaffold11560023900 Alkaloid 7DLGT low borderline
LchiScaffold11560023920 Alkaloid 7DLGT low borderline
LchiScaffold11560023940 Alkaloid 7DLGT low borderline
LchiScaffold11560023950 Alkaloid 7DLGT low borderline
LchiScaffold11560023960 Alkaloid 7DLGT low borderline
LchiScaffold11560023980 Alkaloid 7DLGT low borderline
LchiScaffold11580024190 Alkaloid 7DLGT medium pass
LchiScaffold11670025220 Alkaloid 7DLGT medium pass
LchiScaffold12530036580 Alkaloid 7DLGT low borderline
LchiScaffold12530036590 Alkaloid 7DLGT low borderline
LchiScaffold12720037400 Alkaloid 7DLGT low borderline
LchiScaffold12720037450 Alkaloid 7DLGT low borderline
LchiScaffold12860039200 Alkaloid 7DLGT low borderline
LchiScaffold12860039210 Alkaloid 7DLGT low borderline
LchiScaffold12860039260 Alkaloid 7DLGT medium pass
LchiScaffold12860039270 Alkaloid 7DLGT low borderline
LchiScaffold12860039280 Alkaloid 7DLGT medium pass
LchiScaffold12860039300 Alkaloid 7DLGT low borderline
LchiScaffold12860039310 Alkaloid 7DLGT low borderline
LchiScaffold13950055300 Alkaloid 7DLGT low borderline
LchiScaffold13950055310 Alkaloid 7DLGT low borderline
LchiScaffold13950055320 Alkaloid 7DLGT low borderline