PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
LchiScaffold11670025510 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold12380034420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold14000056790 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold14150058830 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold15220072620 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold1580076010 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold1590078850 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold16060080040 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold16980085540 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold16980085550 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold17580093240 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold19280108820 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold26350152940 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold26370152960 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold26820153840 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold27580157860 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold27950159030 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold2910172320 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold34190197810 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold3420198380 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold3560208110 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold36370212950 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold390218930 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold4530238140 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold4530238150 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold4530238160 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold4530238170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold4530238180 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5270261620 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold570269450 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5800270320 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
LchiScaffold5990276030 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276040 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276090 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276100 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276110 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276120 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276130 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276140 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276150 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276180 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276200 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276220 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276250 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276270 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276280 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276290 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276300 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
LchiScaffold5990276310 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL