PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP71
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Gene Pathway Family Confidence Status Best Target
LchiScaffold36820214260 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
LchiScaffold4090223780 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold440236310 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
LchiScaffold5010248380 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
LchiScaffold5420265710 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold5500266380 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold5500266410 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold5530266750 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold6460280970 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold6820287730 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
LchiScaffold7110291160 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold7230297320 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
LchiScaffold7500301940 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold7710305830 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold7820310790 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold7820311110 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold8120318970 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold9150334850 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
LchiScaffold9150334950 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold9270341440 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
LchiScaffold9860351740 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
LchiScaffold9860351750 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO