PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
LchiScaffold5300262610 Terpenoid CYP76 medium borderline
LchiScaffold5300262620 Terpenoid CYP76 medium pass
LchiScaffold5300262630 Terpenoid CYP76 medium borderline
LchiScaffold5300262660 Terpenoid CYP76 medium borderline
LchiScaffold5300263280 Terpenoid CYP76 medium pass
LchiScaffold5300263290 Terpenoid CYP76 medium borderline
LchiScaffold5300263330 Terpenoid CYP76 low borderline
LchiScaffold5300264070 Terpenoid CYP76 medium borderline
LchiScaffold5500266210 Terpenoid CYP76 low borderline
LchiScaffold570269610 Terpenoid CYP76 medium borderline
LchiScaffold570269650 Terpenoid CYP76 medium borderline
LchiScaffold5750269830 Terpenoid CYP76 low borderline
LchiScaffold6110279160 Terpenoid CYP76 low borderline
LchiScaffold6110279170 Terpenoid CYP76 medium borderline
LchiScaffold6400280880 Terpenoid CYP76 medium borderline
LchiScaffold6460281000 Terpenoid CYP76 medium borderline
LchiScaffold6820287030 Terpenoid CYP76 low borderline
LchiScaffold7230295700 Terpenoid CYP76 low borderline
LchiScaffold7230296130 Terpenoid CYP76 low borderline
LchiScaffold7740305900 Terpenoid CYP76 medium borderline
LchiScaffold7770309050 Terpenoid CYP76 low borderline
LchiScaffold7770309080 Terpenoid CYP76 low borderline
LchiScaffold7820310800 Terpenoid CYP76 medium borderline
LchiScaffold8120318960 Terpenoid CYP76 medium borderline
LchiScaffold8180319960 Terpenoid CYP76 medium pass
LchiScaffold8470325640 Terpenoid CYP76 medium borderline
LchiScaffold860326390 Terpenoid CYP76 medium borderline
LchiScaffold8800328330 Terpenoid CYP76 medium pass
LchiScaffold8810329100 Terpenoid CYP76 medium borderline
LchiScaffold9200340340 Terpenoid CYP76 low borderline
LchiScaffold9410343170 Terpenoid CYP76 low borderline
LchiScaffold9560346010 Terpenoid CYP76 medium borderline
LchiScaffold9830349680 Terpenoid CYP76 medium borderline
LchiScaffold9850351260 Terpenoid CYP76 medium borderline