PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
LchiScaffold3450200690 Steroid DWF4/CYP90B1 low borderline
LchiScaffold35810210890 Steroid DWF4/CYP90B1 medium pass
LchiScaffold35810210900 Steroid DWF4/CYP90B1 low borderline
LchiScaffold36820213850 Steroid DWF4/CYP90B1 low borderline
LchiScaffold4260229680 Steroid DWF4/CYP90B1 low borderline
LchiScaffold4260229690 Steroid DWF4/CYP90B1 low borderline
LchiScaffold4400236380 Steroid DWF4/CYP90B1 low borderline
LchiScaffold4400236440 Steroid DWF4/CYP90B1 low borderline
LchiScaffold4400236450 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5060251990 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5060252840 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5060252860 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5070254620 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5070255130 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5270260940 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5300262540 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5300262550 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5300262610 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5300262660 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5300263330 Steroid DWF4/CYP90B1 medium borderline
LchiScaffold5500266210 Steroid DWF4/CYP90B1 medium borderline
LchiScaffold5500266380 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5530266750 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5750269830 Steroid DWF4/CYP90B1 medium borderline
LchiScaffold5940274950 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5940274960 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5940274980 Steroid DWF4/CYP90B1 low borderline
LchiScaffold5940274990 Steroid DWF4/CYP90B1 low borderline
LchiScaffold6110279170 Steroid DWF4/CYP90B1 low borderline
LchiScaffold720293350 Steroid DWF4/CYP90B1 low borderline
LchiScaffold7230295700 Steroid DWF4/CYP90B1 medium borderline
LchiScaffold7230296130 Steroid DWF4/CYP90B1 medium borderline
LchiScaffold7270299360 Steroid DWF4/CYP90B1 low borderline
LchiScaffold7270299370 Steroid DWF4/CYP90B1 low borderline
LchiScaffold7500301940 Steroid DWF4/CYP90B1 low borderline
LchiScaffold8120318970 Steroid DWF4/CYP90B1 low borderline
LchiScaffold8470325640 Steroid DWF4/CYP90B1 low borderline
LchiScaffold860326390 Steroid DWF4/CYP90B1 low borderline
LchiScaffold8800328330 Steroid DWF4/CYP90B1 low borderline
LchiScaffold8860332090 Steroid DWF4/CYP90B1 medium borderline
LchiScaffold8900332550 Steroid DWF4/CYP90B1 low borderline
LchiScaffold8900332570 Steroid DWF4/CYP90B1 low borderline
LchiScaffold9150334940 Steroid DWF4/CYP90B1 low borderline
LchiScaffold9150334960 Steroid DWF4/CYP90B1 low borderline
LchiScaffold9830349680 Steroid DWF4/CYP90B1 low borderline
LchiScaffold9860351740 Steroid DWF4/CYP90B1 low borderline
LchiScaffold9860351750 Steroid DWF4/CYP90B1 low borderline
LchiScaffold9890352490 Steroid DWF4/CYP90B1 low borderline