PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Gene Pathway Family Confidence Status
LchiScaffold34190197890 Flavonoid F3H low borderline
LchiScaffold35320206430 Flavonoid F3H medium borderline
LchiScaffold3550207430 Flavonoid F3H medium borderline
LchiScaffold35880211020 Flavonoid F3H medium borderline
LchiScaffold3930220580 Flavonoid F3H medium borderline
LchiScaffold3930220590 Flavonoid F3H medium borderline
LchiScaffold3930220600 Flavonoid F3H medium borderline
LchiScaffold3930220620 Flavonoid F3H medium borderline
LchiScaffold3930220630 Flavonoid F3H medium borderline
LchiScaffold4320233690 Flavonoid F3H low borderline
LchiScaffold4320235020 Flavonoid F3H medium borderline
LchiScaffold5010248170 Flavonoid F3H medium borderline
LchiScaffold5010248200 Flavonoid F3H medium borderline
LchiScaffold5010248220 Flavonoid F3H medium borderline
LchiScaffold5010248240 Flavonoid F3H medium borderline
LchiScaffold5010248250 Flavonoid F3H medium borderline
LchiScaffold5010248300 Flavonoid F3H medium borderline
LchiScaffold50247130 Flavonoid F3H medium borderline
LchiScaffold50247150 Flavonoid F3H medium borderline
LchiScaffold50247160 Flavonoid F3H low borderline
LchiScaffold50247170 Flavonoid F3H medium borderline
LchiScaffold5130255510 Flavonoid F3H medium borderline
LchiScaffold5270261310 Flavonoid F3H medium borderline
LchiScaffold5270261320 Flavonoid F3H medium borderline
LchiScaffold5270261330 Flavonoid F3H medium borderline
LchiScaffold5850272590 Flavonoid F3H medium borderline
LchiScaffold5850272640 Flavonoid F3H medium borderline
LchiScaffold5850272660 Flavonoid F3H medium borderline
LchiScaffold5850272710 Flavonoid F3H medium borderline
LchiScaffold5940274500 Flavonoid F3H medium borderline
LchiScaffold5940274510 Flavonoid F3H medium borderline
LchiScaffold5940274520 Flavonoid F3H medium borderline
LchiScaffold5940274530 Flavonoid F3H medium borderline
LchiScaffold5940275640 Flavonoid F3H medium borderline
LchiScaffold6520281260 Flavonoid F3H medium borderline
LchiScaffold6820285290 Flavonoid F3H medium borderline
LchiScaffold6820286850 Flavonoid F3H medium borderline
LchiScaffold6820288160 Flavonoid F3H medium borderline
LchiScaffold7080290240 Flavonoid F3H medium borderline
LchiScaffold7080290250 Flavonoid F3H medium borderline
LchiScaffold7080290600 Flavonoid F3H medium borderline
LchiScaffold7110291480 Flavonoid F3H medium borderline
LchiScaffold7210293630 Flavonoid F3H low borderline
LchiScaffold7210293870 Flavonoid F3H medium borderline
LchiScaffold7210293880 Flavonoid F3H medium borderline
LchiScaffold7230295760 Flavonoid F3H medium borderline
LchiScaffold7750307320 Flavonoid F3H medium borderline
LchiScaffold8050318000 Flavonoid F3H low borderline
LchiScaffold840323940 Flavonoid F3H low borderline
LchiScaffold840323950 Flavonoid F3H low borderline