PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
LchiScaffold3050181180 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
LchiScaffold3050181210 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold31840184750 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold31840184770 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold34670202420 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold34670202430 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold35520207620 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5070254580 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
LchiScaffold5070254590 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
LchiScaffold5070254600 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
LchiScaffold5070254630 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5070254660 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5070254680 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5070254690 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5070254770 Alkaloid GES low borderline GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5070254790 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5070254800 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold5530266680 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
LchiScaffold7230295800 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold8060318870 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold860326240 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold910334110 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold9220340860 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold9220340900 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold9220340920 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
LchiScaffold960347370 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold960347380 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold9860351830 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
LchiScaffold9860351840 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE