PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
LchiScaffold10150003510 Alkaloid T3O medium borderline
LchiScaffold10240004490 Alkaloid T3O medium pass
LchiScaffold10350006690 Alkaloid T3O low borderline
LchiScaffold10430008050 Alkaloid T3O medium borderline
LchiScaffold10430008060 Alkaloid T3O medium borderline
LchiScaffold10430008190 Alkaloid T3O medium borderline
LchiScaffold10430008370 Alkaloid T3O medium pass
LchiScaffold10430008380 Alkaloid T3O low borderline
LchiScaffold10430008390 Alkaloid T3O low borderline
LchiScaffold10880012960 Alkaloid T3O medium borderline
LchiScaffold10880013010 Alkaloid T3O medium borderline
LchiScaffold10880013020 Alkaloid T3O medium borderline
LchiScaffold10880013070 Alkaloid T3O medium borderline
LchiScaffold10880013090 Alkaloid T3O medium borderline
LchiScaffold10880013110 Alkaloid T3O medium borderline
LchiScaffold10880013120 Alkaloid T3O medium borderline
LchiScaffold10880013200 Alkaloid T3O low borderline
LchiScaffold10980014370 Alkaloid T3O medium borderline
LchiScaffold11090016290 Alkaloid T3O low borderline
LchiScaffold11270017970 Alkaloid T3O medium borderline
LchiScaffold11470021110 Alkaloid T3O low borderline
LchiScaffold11470021450 Alkaloid T3O low borderline
LchiScaffold11470021460 Alkaloid T3O low borderline
LchiScaffold11910027160 Alkaloid T3O low borderline
LchiScaffold11910027560 Alkaloid T3O low borderline
LchiScaffold1210032060 Alkaloid T3O medium pass
LchiScaffold12380034640 Alkaloid T3O medium borderline
LchiScaffold12410035430 Alkaloid T3O medium borderline
LchiScaffold12910039680 Alkaloid T3O medium borderline
LchiScaffold12920040140 Alkaloid T3O medium borderline
LchiScaffold12990041530 Alkaloid T3O medium borderline
LchiScaffold1350049520 Alkaloid T3O medium borderline
LchiScaffold1350049530 Alkaloid T3O medium borderline
LchiScaffold1350049540 Alkaloid T3O medium borderline
LchiScaffold1350049560 Alkaloid T3O medium borderline
LchiScaffold1350049610 Alkaloid T3O medium borderline
LchiScaffold1350049650 Alkaloid T3O medium borderline
LchiScaffold13580051000 Alkaloid T3O medium borderline
LchiScaffold14130058120 Alkaloid T3O medium borderline
LchiScaffold14380060710 Alkaloid T3O medium borderline
LchiScaffold14380060740 Alkaloid T3O medium borderline
LchiScaffold1460063740 Alkaloid T3O medium pass
LchiScaffold1470064580 Alkaloid T3O low borderline
LchiScaffold1480066400 Alkaloid T3O medium borderline
LchiScaffold1480066410 Alkaloid T3O medium borderline
LchiScaffold1480066420 Alkaloid T3O medium borderline
LchiScaffold1480066450 Alkaloid T3O medium borderline
LchiScaffold1480066470 Alkaloid T3O medium borderline
LchiScaffold1480066500 Alkaloid T3O medium borderline
LchiScaffold14830067130 Alkaloid T3O medium borderline