PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
LchiScaffold27950159080 Alkaloid T3O medium borderline
LchiScaffold27950159090 Alkaloid T3O medium borderline
LchiScaffold280160200 Alkaloid T3O medium borderline
LchiScaffold280160210 Alkaloid T3O medium borderline
LchiScaffold280160300 Alkaloid T3O medium borderline
LchiScaffold280160330 Alkaloid T3O medium borderline
LchiScaffold280160350 Alkaloid T3O medium borderline
LchiScaffold280160370 Alkaloid T3O medium borderline
LchiScaffold280160390 Alkaloid T3O medium borderline
LchiScaffold280160400 Alkaloid T3O medium borderline
LchiScaffold280160440 Alkaloid T3O medium borderline
LchiScaffold280160450 Alkaloid T3O medium borderline
LchiScaffold28120163010 Alkaloid T3O low borderline
LchiScaffold29680176280 Alkaloid T3O low borderline
LchiScaffold30020178370 Alkaloid T3O low borderline
LchiScaffold30040179050 Alkaloid T3O medium pass
LchiScaffold30120179640 Alkaloid T3O medium borderline
LchiScaffold30120179680 Alkaloid T3O medium borderline
LchiScaffold31270183820 Alkaloid T3O medium borderline
LchiScaffold320185420 Alkaloid T3O medium borderline
LchiScaffold320185430 Alkaloid T3O medium borderline
LchiScaffold320185440 Alkaloid T3O medium borderline
LchiScaffold320187420 Alkaloid T3O low borderline
LchiScaffold320187670 Alkaloid T3O medium pass
LchiScaffold3220188480 Alkaloid T3O medium borderline
LchiScaffold3220188510 Alkaloid T3O medium borderline
LchiScaffold32710191080 Alkaloid T3O medium borderline
LchiScaffold3320192910 Alkaloid T3O high pass
LchiScaffold33360193820 Alkaloid T3O medium borderline
LchiScaffold33410194680 Alkaloid T3O medium borderline
LchiScaffold33440194810 Alkaloid T3O medium borderline
LchiScaffold3440199840 Alkaloid T3O medium borderline
LchiScaffold3440199850 Alkaloid T3O medium borderline
LchiScaffold3440199920 Alkaloid T3O medium borderline
LchiScaffold3450200690 Alkaloid T3O medium borderline
LchiScaffold3560207920 Alkaloid T3O medium borderline
LchiScaffold35990211260 Alkaloid T3O medium pass
LchiScaffold3630212730 Alkaloid T3O medium pass
LchiScaffold36820213850 Alkaloid T3O medium borderline
LchiScaffold36820213870 Alkaloid T3O medium borderline
LchiScaffold36860214800 Alkaloid T3O medium borderline
LchiScaffold36860214820 Alkaloid T3O medium borderline
LchiScaffold36980216050 Alkaloid T3O medium borderline
LchiScaffold3700217460 Alkaloid T3O low borderline
LchiScaffold3850218080 Alkaloid T3O low borderline
LchiScaffold4090223780 Alkaloid T3O medium borderline
LchiScaffold4260229670 Alkaloid T3O low borderline
LchiScaffold4260229680 Alkaloid T3O medium pass
LchiScaffold4260229690 Alkaloid T3O low borderline
LchiScaffold4260229750 Alkaloid T3O low borderline