PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
LchiScaffold27310156930 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
LchiScaffold28030161790 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
LchiScaffold30230179860 Terpenoid TPS medium pass TPS__00131__sp_J9QS23_TPS9_SELML
LchiScaffold3050181180 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold3050181210 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold31840184750 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
LchiScaffold31840184770 Terpenoid TPS low borderline TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold33340193750 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LchiScaffold34670202420 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold34670202430 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold35520207620 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold5070254580 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
LchiScaffold5070254590 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
LchiScaffold5070254600 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
LchiScaffold5070254630 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
LchiScaffold5070254660 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
LchiScaffold5070254680 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold5070254690 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold5070254770 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold5070254790 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold5070254800 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold5530266680 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
LchiScaffold5530266690 Terpenoid TPS low borderline TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
LchiScaffold5530266700 Terpenoid TPS low borderline TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
LchiScaffold7230295800 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold8060318870 Terpenoid TPS low borderline TPS__00117__sp_G8H5M7_TPS9_SOLHA
LchiScaffold860326240 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold910334110 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
LchiScaffold9220340860 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold9220340900 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
LchiScaffold9220340920 Terpenoid TPS medium pass TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA
LchiScaffold960347370 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
LchiScaffold960347380 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold9860351830 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
LchiScaffold9860351840 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU