PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
LchiScaffold10420007860 Flavonoid ANR low borderline
LchiScaffold1170025660 Flavonoid ANR low borderline
LchiScaffold12840038600 Flavonoid ANR low borderline
LchiScaffold12840038610 Flavonoid ANR medium borderline
LchiScaffold12840038630 Flavonoid ANR medium borderline
LchiScaffold1350049870 Flavonoid ANR low borderline
LchiScaffold15080071340 Flavonoid ANR low borderline
LchiScaffold15570074850 Flavonoid ANR medium borderline
LchiScaffold15570074870 Flavonoid ANR medium borderline
LchiScaffold17330091180 Flavonoid ANR medium pass
LchiScaffold17330091190 Flavonoid ANR medium borderline
LchiScaffold17330091200 Flavonoid ANR medium borderline
LchiScaffold17330091240 Flavonoid ANR medium borderline
LchiScaffold17330091250 Flavonoid ANR medium borderline
LchiScaffold17330091260 Flavonoid ANR medium borderline
LchiScaffold17330091270 Flavonoid ANR medium borderline
LchiScaffold17330091410 Flavonoid ANR medium borderline
LchiScaffold17330091420 Flavonoid ANR medium borderline
LchiScaffold17330091440 Flavonoid ANR medium borderline
LchiScaffold17330091450 Flavonoid ANR medium pass
LchiScaffold17330091480 Flavonoid ANR medium borderline
LchiScaffold17330091510 Flavonoid ANR medium pass
LchiScaffold17330091530 Flavonoid ANR medium borderline
LchiScaffold21600126400 Flavonoid ANR low borderline
LchiScaffold22730131360 Flavonoid ANR medium borderline
LchiScaffold23550137090 Flavonoid ANR low borderline
LchiScaffold23550137100 Flavonoid ANR medium borderline
LchiScaffold2580150590 Flavonoid ANR medium borderline
LchiScaffold2790158490 Flavonoid ANR low borderline
LchiScaffold27950158840 Flavonoid ANR low borderline
LchiScaffold28210164470 Flavonoid ANR medium pass
LchiScaffold28210164480 Flavonoid ANR medium borderline
LchiScaffold28820168510 Flavonoid ANR medium borderline
LchiScaffold30970183040 Flavonoid ANR medium pass
LchiScaffold3260190360 Flavonoid ANR low borderline
LchiScaffold36070211370 Flavonoid ANR medium borderline
LchiScaffold3960220830 Flavonoid ANR medium borderline
LchiScaffold40221960 Flavonoid ANR medium borderline
LchiScaffold4260230010 Flavonoid ANR low borderline
LchiScaffold4320233450 Flavonoid ANR low borderline
LchiScaffold5070254860 Flavonoid ANR medium borderline
LchiScaffold5210257530 Flavonoid ANR low borderline
LchiScaffold5300262130 Flavonoid ANR medium borderline
LchiScaffold5750269880 Flavonoid ANR medium borderline
LchiScaffold6500281110 Flavonoid ANR low borderline
LchiScaffold6500281130 Flavonoid ANR medium borderline
LchiScaffold6820284860 Flavonoid ANR medium borderline
LchiScaffold7230297150 Flavonoid ANR medium borderline
LchiScaffold7790309890 Flavonoid ANR low borderline
LchiScaffold8610326820 Flavonoid ANR low borderline