Liriodendron chinense (liriodendron_chinense)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 27.23% Alkaloid pathway 23.42% Phenylpropanoid pathway 20.14% Flavonoid pathway 13.93% Rosmarinic acid pathway 9.93% Steroid pathway 5.35%

Family Distribution

5196 Family-Level Calls

C3'H/CYP98A 6.95% C4H 6.85% BAHD 5.0% CYP76 4.5% IFS 4.12% UGT 4.06% T3O 3.89% 7DLGT 3.85%

Other Families 60.78%

More Families (97)

UFGT 193 3.71% POD 155 2.98% 4CL 150 2.89% DWF4/CYP90B1 148 2.85% F3'H/CYP75B 127 2.44% BR6OX2/CYP85A2 118 2.27% CAD 115 2.21% F3H 103 1.98% TPS 85 1.64% GES 79 1.52% CYP71 72 1.39% COMT 71 1.37% CODM/T6ODM 68 1.31% CAS 68 1.31% NMT 67 1.29% TRI/TRII 63 1.21% 16OMT 61 1.17% T16H 60 1.15% STR 59 1.14% SGD 57 1.1% SMT1/SMT2/SMT3 56 1.08% HCT 54 1.04% CSE 54 1.04% ANR 52 1.0% CYP90D1 50 0.96% PYKS 45 0.87% GS 45 0.87% IFR 44 0.85% G8O/G8H 40 0.77% H6H 38 0.73% LAC 38 0.73% COR 32 0.62% IO 29 0.56% RAS 29 0.56% CCR 28 0.54% SLS 27 0.52% PAL 27 0.52% TAT 27 0.52% F3'5'H/CYP75A 26 0.5% 7DLH 25 0.48% CHS 25 0.48% CYP51G1 25 0.48% FNS 24 0.46% PMT 23 0.44% NCS 22 0.42% DFR 20 0.38% BR6OX1/CYP85A1 19 0.37% AACT 19 0.37% MPO 18 0.35% CPD/CYP90A1 18 0.35% CYP719 17 0.33% BBE 17 0.33% 8HGO 15 0.29% F5H/CYP84A 15 0.29% TYDC_DDC 13 0.25% ANS/LDOX 13 0.25% LAMT 11 0.21% CNMT 10 0.19% CHI 10 0.19% CCoAOMT 10 0.19% GGPPS 10 0.19% DXS 9 0.17% CPR 8 0.15% ROT3/CYP90C1 8 0.15% SQS/FDFT1 7 0.13% HPPR 6 0.12% FPPS 6 0.12% MVK 6 0.12% ODC 5 0.1% XMT_MXMT_DXMT 5 0.1% SMO1/SMO2 5 0.1% ISY 4 0.08% DWF7 4 0.08% DET2 4 0.08% MVD 4 0.08% ADC 3 0.06% TDC 3 0.06% FLS 3 0.06% SQE 3 0.06% HMGS 3 0.06% CYP80B1 2 0.04% CPI1 2 0.04% IDI 2 0.04% PMK 2 0.04% DXR 2 0.04% HMGR 2 0.04% CYP80F1 1 0.02% 6OMT_4OMT_SOMT 1 0.02% HYD1 1 0.02% DWF1 1 0.02% FK 1 0.02% DWF5 1 0.02% HDR/IspH 1 0.02% CMK/IspE 1 0.02% HDS/IspG 1 0.02% MDS/IspF 1 0.02% MCT/IspD 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	565	20	UGT (192)	View species results
Alkaloid pathway	486	23	7DLGT (113)	View species results
Phenylpropanoid pathway	418	11	POD (141)	View species results
Flavonoid pathway	289	11	UFGT (181)	View species results
Rosmarinic acid pathway	206	7	C4H (118)	View species results
Steroid pathway	111	13	CAS (57)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	24	2194	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	343	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Phenylpropanoid pathway

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
LchiScaffold570268960	Phenylpropanoid	POD	low	borderline	POD__00007__sp_P0C5C9_REHYA_ORYSJ
LchiScaffold610278470	Phenylpropanoid	POD	medium	pass	POD__00006__sp_O22850_GPX3_ARATH
LchiScaffold6110278900	Phenylpropanoid	POD	medium	pass	POD__00021__sp_Q9LEH3_PER15_IPOBA
LchiScaffold6460280980	Phenylpropanoid	POD	medium	pass	POD__00027__sp_Q9XIV8_PERN1_TOBAC
LchiScaffold6820284730	Phenylpropanoid	POD	medium	pass	POD__00021__sp_Q9LEH3_PER15_IPOBA
LchiScaffold6820286010	Phenylpropanoid	POD	medium	pass	POD__00027__sp_Q9XIV8_PERN1_TOBAC
LchiScaffold7080289430	Phenylpropanoid	POD	medium	pass	POD__00006__sp_O22850_GPX3_ARATH
LchiScaffold7110291450	Phenylpropanoid	POD	medium	pass	POD__00028__sp_Q9ZVD5_AGO4_ARATH
LchiScaffold7180292870	Phenylpropanoid	POD	medium	pass	POD__00021__sp_Q9LEH3_PER15_IPOBA
LchiScaffold7180292880	Phenylpropanoid	POD	medium	pass	POD__00021__sp_Q9LEH3_PER15_IPOBA
LchiScaffold7230298190	Phenylpropanoid	POD	medium	pass	POD__00003__sp_A9PCL4_PRX2_POPTR
LchiScaffold7560302180	Phenylpropanoid	POD	medium	pass	POD__00020__sp_Q9FE01_APX2_ORYSJ
LchiScaffold7790309590	Phenylpropanoid	POD	medium	pass	POD__00001__sp_A5H452_PER70_MAIZE
LchiScaffold7940314360	Phenylpropanoid	POD	medium	pass	POD__00021__sp_Q9LEH3_PER15_IPOBA
LchiScaffold800315110	Phenylpropanoid	POD	medium	pass	POD__00012__sp_Q10N21_APX1_ORYSJ
LchiScaffold800315280	Phenylpropanoid	POD	medium	pass	POD__00027__sp_Q9XIV8_PERN1_TOBAC
LchiScaffold800315820	Phenylpropanoid	POD	medium	pass	POD__00018__sp_Q8H0V5_OCP3_ARATH
LchiScaffold8860331870	Phenylpropanoid	POD	medium	pass	POD__00027__sp_Q9XIV8_PERN1_TOBAC
LchiScaffold9150339650	Phenylpropanoid	POD	medium	pass	POD__00021__sp_Q9LEH3_PER15_IPOBA
LchiScaffold9330342540	Phenylpropanoid	POD	medium	pass	POD__00028__sp_Q9ZVD5_AGO4_ARATH
LchiScaffold9840350470	Phenylpropanoid	POD	medium	pass	POD__00006__sp_O22850_GPX3_ARATH