PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold32230188630 Alkaloid STR medium pass
LchiScaffold3260189790 Alkaloid STR low borderline
LchiScaffold34190197900 Alkaloid STR low borderline
LchiScaffold35780208910 Alkaloid STR low borderline
LchiScaffold35780209350 Alkaloid STR low borderline
LchiScaffold3850218600 Alkaloid STR medium pass
LchiScaffold3960220770 Alkaloid STR low borderline
LchiScaffold3970221480 Alkaloid STR low borderline
LchiScaffold4530238120 Alkaloid STR medium pass
LchiScaffold6040276920 Alkaloid STR low borderline
LchiScaffold7230297610 Alkaloid STR low borderline
LchiScaffold7800310460 Alkaloid STR low borderline
LchiScaffold800315640 Alkaloid STR low borderline
LchiScaffold8800328790 Alkaloid STR medium pass
LchiScaffold8800328800 Alkaloid STR low borderline
LchiScaffold8800328810 Alkaloid STR low borderline
LchiScaffold8840331500 Alkaloid STR low borderline
LchiScaffold9150335410 Alkaloid STR low borderline
LchiScaffold9150335430 Alkaloid STR low borderline
LchiScaffold9150335440 Alkaloid STR low borderline
LchiScaffold9200340780 Alkaloid STR low borderline
LchiScaffold1040007510 Alkaloid T16H medium borderline
LchiScaffold1040007530 Alkaloid T16H medium borderline
LchiScaffold10880013080 Alkaloid T16H medium borderline
LchiScaffold10980014360 Alkaloid T16H medium borderline
LchiScaffold11910031350 Alkaloid T16H low borderline
LchiScaffold12910039670 Alkaloid T16H medium borderline
LchiScaffold12910039690 Alkaloid T16H medium borderline
LchiScaffold1350049550 Alkaloid T16H medium borderline
LchiScaffold1350049580 Alkaloid T16H medium borderline
LchiScaffold1350049600 Alkaloid T16H medium borderline
LchiScaffold1350049630 Alkaloid T16H medium borderline
LchiScaffold1470064490 Alkaloid T16H medium borderline
LchiScaffold1470064820 Alkaloid T16H medium borderline
LchiScaffold1480066430 Alkaloid T16H medium borderline
LchiScaffold16960085230 Alkaloid T16H medium borderline
LchiScaffold1720089110 Alkaloid T16H medium borderline
LchiScaffold17660094810 Alkaloid T16H medium borderline
LchiScaffold1850102280 Alkaloid T16H medium borderline
LchiScaffold1930110020 Alkaloid T16H medium borderline
LchiScaffold19790113620 Alkaloid T16H medium borderline
LchiScaffold19990114980 Alkaloid T16H medium borderline
LchiScaffold23140133740 Alkaloid T16H medium borderline
LchiScaffold24670142910 Alkaloid T16H medium borderline
LchiScaffold2480145340 Alkaloid T16H medium borderline
LchiScaffold25080147270 Alkaloid T16H medium borderline
LchiScaffold2720156580 Alkaloid T16H medium borderline
LchiScaffold2720156610 Alkaloid T16H medium borderline
LchiScaffold280160230 Alkaloid T16H medium borderline
LchiScaffold280160250 Alkaloid T16H medium borderline