PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold280160260 Alkaloid T16H medium borderline
LchiScaffold280160270 Alkaloid T16H medium borderline
LchiScaffold280160280 Alkaloid T16H medium pass
LchiScaffold29210174440 Alkaloid T16H medium borderline
LchiScaffold32710191090 Alkaloid T16H medium borderline
LchiScaffold3320192890 Alkaloid T16H medium borderline
LchiScaffold33360193790 Alkaloid T16H medium borderline
LchiScaffold33830195690 Alkaloid T16H medium borderline
LchiScaffold3440199780 Alkaloid T16H medium borderline
LchiScaffold3440199790 Alkaloid T16H medium borderline
LchiScaffold3440199870 Alkaloid T16H medium borderline
LchiScaffold34760204250 Alkaloid T16H medium borderline
LchiScaffold3560207910 Alkaloid T16H medium borderline
LchiScaffold4400236380 Alkaloid T16H medium borderline
LchiScaffold5270260940 Alkaloid T16H medium borderline
LchiScaffold5300261940 Alkaloid T16H medium borderline
LchiScaffold5300262540 Alkaloid T16H low borderline
LchiScaffold5300262590 Alkaloid T16H medium borderline
LchiScaffold5300262600 Alkaloid T16H medium borderline
LchiScaffold5300262610 Alkaloid T16H medium borderline
LchiScaffold5300263280 Alkaloid T16H medium borderline
LchiScaffold5300263290 Alkaloid T16H medium borderline
LchiScaffold5500266380 Alkaloid T16H medium borderline
LchiScaffold6110279170 Alkaloid T16H medium borderline
LchiScaffold6400280880 Alkaloid T16H medium borderline
LchiScaffold7110291160 Alkaloid T16H medium borderline
LchiScaffold7710305830 Alkaloid T16H medium borderline
LchiScaffold7820310790 Alkaloid T16H medium borderline
LchiScaffold9850351260 Alkaloid T16H medium borderline
LchiScaffold9860351740 Alkaloid T16H medium borderline
LchiScaffold9860351750 Alkaloid T16H medium borderline
LchiScaffold10150003510 Alkaloid T3O medium borderline
LchiScaffold10240004490 Alkaloid T3O medium pass
LchiScaffold10350006690 Alkaloid T3O low borderline
LchiScaffold10430008050 Alkaloid T3O medium borderline
LchiScaffold10430008060 Alkaloid T3O medium borderline
LchiScaffold10430008190 Alkaloid T3O medium borderline
LchiScaffold10430008370 Alkaloid T3O medium pass
LchiScaffold10430008380 Alkaloid T3O low borderline
LchiScaffold10430008390 Alkaloid T3O low borderline
LchiScaffold10880012960 Alkaloid T3O medium borderline
LchiScaffold10880013010 Alkaloid T3O medium borderline
LchiScaffold10880013020 Alkaloid T3O medium borderline
LchiScaffold10880013070 Alkaloid T3O medium borderline
LchiScaffold10880013090 Alkaloid T3O medium borderline
LchiScaffold10880013110 Alkaloid T3O medium borderline
LchiScaffold10880013120 Alkaloid T3O medium borderline
LchiScaffold10880013200 Alkaloid T3O low borderline
LchiScaffold10980014370 Alkaloid T3O medium borderline
LchiScaffold11090016290 Alkaloid T3O low borderline