PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
LchiScaffold22320129140 Alkaloid 7DLGT medium pass
LchiScaffold22320129150 Alkaloid 7DLGT medium pass
LchiScaffold22320129160 Alkaloid 7DLGT medium pass
LchiScaffold22320129180 Alkaloid 7DLGT medium pass
LchiScaffold22320129200 Alkaloid 7DLGT high pass
LchiScaffold22320129210 Alkaloid 7DLGT medium pass
LchiScaffold22320129220 Alkaloid 7DLGT high pass
LchiScaffold22320129230 Alkaloid 7DLGT medium pass
LchiScaffold22320129240 Alkaloid 7DLGT medium pass
LchiScaffold22320129250 Alkaloid 7DLGT medium pass
LchiScaffold22320129280 Alkaloid 7DLGT medium pass
LchiScaffold22320129290 Alkaloid 7DLGT low borderline
LchiScaffold22910132850 Alkaloid 7DLGT low borderline
LchiScaffold22910132860 Alkaloid 7DLGT low borderline
LchiScaffold24110139180 Alkaloid 7DLGT low borderline
LchiScaffold24110139190 Alkaloid 7DLGT medium pass
LchiScaffold24110139200 Alkaloid 7DLGT low borderline
LchiScaffold24360141230 Alkaloid 7DLGT medium pass
LchiScaffold24360141250 Alkaloid 7DLGT low borderline
LchiScaffold25500148060 Alkaloid 7DLGT low borderline
LchiScaffold25500148090 Alkaloid 7DLGT medium pass
LchiScaffold25500148100 Alkaloid 7DLGT low borderline
LchiScaffold2580149430 Alkaloid 7DLGT medium pass
LchiScaffold2700154670 Alkaloid 7DLGT medium pass
LchiScaffold2700154730 Alkaloid 7DLGT low borderline
LchiScaffold2700154750 Alkaloid 7DLGT low borderline
LchiScaffold2700154760 Alkaloid 7DLGT low borderline
LchiScaffold2700154800 Alkaloid 7DLGT low borderline
LchiScaffold2720156350 Alkaloid 7DLGT medium pass
LchiScaffold2720156390 Alkaloid 7DLGT high pass
LchiScaffold27690158040 Alkaloid 7DLGT medium pass
LchiScaffold27860158230 Alkaloid 7DLGT low borderline
LchiScaffold28280165220 Alkaloid 7DLGT low borderline
LchiScaffold2840166320 Alkaloid 7DLGT low borderline
LchiScaffold2860167290 Alkaloid 7DLGT low borderline
LchiScaffold3040180820 Alkaloid 7DLGT medium pass
LchiScaffold3040180850 Alkaloid 7DLGT low borderline
LchiScaffold3040180870 Alkaloid 7DLGT medium pass
LchiScaffold30970182990 Alkaloid 7DLGT medium pass
LchiScaffold30970183000 Alkaloid 7DLGT medium pass
LchiScaffold30980183050 Alkaloid 7DLGT low borderline
LchiScaffold30980183060 Alkaloid 7DLGT medium pass
LchiScaffold320186490 Alkaloid 7DLGT high pass
LchiScaffold320186500 Alkaloid 7DLGT high pass
LchiScaffold320186510 Alkaloid 7DLGT high pass
LchiScaffold320186530 Alkaloid 7DLGT medium pass
LchiScaffold320186550 Alkaloid 7DLGT medium pass
LchiScaffold3970221470 Alkaloid 7DLGT medium pass
LchiScaffold4260229990 Alkaloid 7DLGT low borderline
LchiScaffold4260230020 Alkaloid 7DLGT medium pass