PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
LchiScaffold4260230050 Alkaloid 7DLGT medium pass
LchiScaffold4260230080 Alkaloid 7DLGT medium pass
LchiScaffold500247380 Alkaloid 7DLGT medium pass
LchiScaffold500247420 Alkaloid 7DLGT medium pass
LchiScaffold500247480 Alkaloid 7DLGT medium pass
LchiScaffold500247510 Alkaloid 7DLGT low borderline
LchiScaffold5060252320 Alkaloid 7DLGT medium pass
LchiScaffold5530266540 Alkaloid 7DLGT medium pass
LchiScaffold7640303190 Alkaloid 7DLGT medium pass
LchiScaffold7640303270 Alkaloid 7DLGT low borderline
LchiScaffold7640303280 Alkaloid 7DLGT low borderline
LchiScaffold7640303310 Alkaloid 7DLGT medium pass
LchiScaffold7640303330 Alkaloid 7DLGT low borderline
LchiScaffold7640303350 Alkaloid 7DLGT low borderline
LchiScaffold7640304100 Alkaloid 7DLGT medium pass
LchiScaffold7640304110 Alkaloid 7DLGT medium pass
LchiScaffold7760308850 Alkaloid 7DLGT low borderline
LchiScaffold7760308870 Alkaloid 7DLGT low borderline
LchiScaffold7760308880 Alkaloid 7DLGT low borderline
LchiScaffold7760308890 Alkaloid 7DLGT low borderline
LchiScaffold7890312250 Alkaloid 7DLGT medium pass
LchiScaffold7890312270 Alkaloid 7DLGT high pass
LchiScaffold7890312300 Alkaloid 7DLGT high pass
LchiScaffold7890312310 Alkaloid 7DLGT medium pass
LchiScaffold7890312320 Alkaloid 7DLGT low borderline
LchiScaffold7890312330 Alkaloid 7DLGT high pass
LchiScaffold7890312350 Alkaloid 7DLGT high pass
LchiScaffold7890312360 Alkaloid 7DLGT high pass
LchiScaffold7890312380 Alkaloid 7DLGT medium pass
LchiScaffold7890312390 Alkaloid 7DLGT high pass
LchiScaffold7890312400 Alkaloid 7DLGT medium pass
LchiScaffold7890312410 Alkaloid 7DLGT low borderline
LchiScaffold7890312420 Alkaloid 7DLGT high pass
LchiScaffold7890312430 Alkaloid 7DLGT high pass
LchiScaffold7890312440 Alkaloid 7DLGT high pass
LchiScaffold7890312450 Alkaloid 7DLGT high pass
LchiScaffold7890312470 Alkaloid 7DLGT medium pass
LchiScaffold7890312480 Alkaloid 7DLGT medium pass
LchiScaffold7890312490 Alkaloid 7DLGT medium pass
LchiScaffold7890312500 Alkaloid 7DLGT high pass
LchiScaffold7940313890 Alkaloid 7DLGT medium pass
LchiScaffold7940313900 Alkaloid 7DLGT medium pass
LchiScaffold7940313920 Alkaloid 7DLGT medium pass
LchiScaffold8050318200 Alkaloid 7DLGT medium pass
LchiScaffold8050318210 Alkaloid 7DLGT medium pass
LchiScaffold8180319750 Alkaloid 7DLGT low borderline
LchiScaffold8530325830 Alkaloid 7DLGT low borderline
LchiScaffold8530325840 Alkaloid 7DLGT low borderline
LchiScaffold8530325860 Alkaloid 7DLGT low borderline
LchiScaffold8530325880 Alkaloid 7DLGT low borderline