PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold8840331080 Alkaloid 7DLGT low borderline
LchiScaffold9130334520 Alkaloid 7DLGT low borderline
LchiScaffold9130334540 Alkaloid 7DLGT low borderline
LchiScaffold9130334560 Alkaloid 7DLGT low borderline
LchiScaffold9150340030 Alkaloid 7DLGT medium pass
LchiScaffold9150340060 Alkaloid 7DLGT high pass
LchiScaffold9150340080 Alkaloid 7DLGT medium pass
LchiScaffold9150340090 Alkaloid 7DLGT medium pass
LchiScaffold9200340550 Alkaloid 7DLGT medium pass
LchiScaffold9200340560 Alkaloid 7DLGT medium pass
LchiScaffold9200340790 Alkaloid 7DLGT medium pass
LchiScaffold9330342330 Alkaloid 7DLGT low borderline
LchiScaffold1000000170 Alkaloid 7DLH medium borderline
LchiScaffold12020031750 Alkaloid 7DLH medium borderline
LchiScaffold14900067560 Alkaloid 7DLH medium borderline
LchiScaffold14900067570 Alkaloid 7DLH medium borderline
LchiScaffold14900067590 Alkaloid 7DLH medium borderline
LchiScaffold14900067600 Alkaloid 7DLH medium borderline
LchiScaffold14900067620 Alkaloid 7DLH medium borderline
LchiScaffold14900067630 Alkaloid 7DLH medium borderline
LchiScaffold14900067640 Alkaloid 7DLH medium borderline
LchiScaffold14900067650 Alkaloid 7DLH medium borderline
LchiScaffold14900067660 Alkaloid 7DLH medium borderline
LchiScaffold14900067670 Alkaloid 7DLH medium borderline
LchiScaffold1650083210 Alkaloid 7DLH medium borderline
LchiScaffold24110139060 Alkaloid 7DLH medium borderline
LchiScaffold24110139070 Alkaloid 7DLH medium borderline
LchiScaffold24110139080 Alkaloid 7DLH medium borderline
LchiScaffold24110139120 Alkaloid 7DLH medium borderline
LchiScaffold29670176040 Alkaloid 7DLH low borderline
LchiScaffold3260190520 Alkaloid 7DLH medium borderline
LchiScaffold3320192900 Alkaloid 7DLH low borderline
LchiScaffold3320192920 Alkaloid 7DLH low borderline
LchiScaffold5940274970 Alkaloid 7DLH medium borderline
LchiScaffold5940274980 Alkaloid 7DLH medium borderline
LchiScaffold5940274990 Alkaloid 7DLH medium borderline
LchiScaffold7270299370 Alkaloid 7DLH medium borderline
LchiScaffold10880012990 Alkaloid 8HGO low borderline
LchiScaffold11910027490 Alkaloid 8HGO medium borderline
LchiScaffold11910030200 Alkaloid 8HGO medium borderline
LchiScaffold11910030210 Alkaloid 8HGO medium borderline
LchiScaffold11910030240 Alkaloid 8HGO medium borderline
LchiScaffold11910030250 Alkaloid 8HGO medium borderline
LchiScaffold20480117880 Alkaloid 8HGO medium borderline
LchiScaffold22320128920 Alkaloid 8HGO medium borderline
LchiScaffold29680176190 Alkaloid 8HGO medium borderline
LchiScaffold29680176200 Alkaloid 8HGO medium borderline
LchiScaffold4320233470 Alkaloid 8HGO medium borderline
LchiScaffold4320233480 Alkaloid 8HGO medium borderline
LchiScaffold4650240210 Alkaloid 8HGO low borderline