PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Mtru06G0005820.1 Alkaloid 7DLGT medium pass
Mtru06G0005840.1 Alkaloid 7DLGT medium pass
Mtru06G0005850.1 Alkaloid 7DLGT high pass
Mtru06G0005860.1 Alkaloid 7DLGT medium pass
Mtru06G0005870.1 Alkaloid 7DLGT high pass
Mtru06G0005880.1 Alkaloid 7DLGT high pass
Mtru06G0005890.1 Alkaloid 7DLGT medium pass
Mtru06G0005900.1 Alkaloid 7DLGT high pass
Mtru06G0005920.1 Alkaloid 7DLGT medium pass
Mtru06G0005930.1 Alkaloid 7DLGT medium pass
Mtru06G0005940.1 Alkaloid 7DLGT high pass
Mtru06G0005950.1 Alkaloid 7DLGT medium pass
Mtru06G0005970.1 Alkaloid 7DLGT medium pass
Mtru06G0005980.1 Alkaloid 7DLGT medium pass
Mtru06G0006010.1 Alkaloid 7DLGT medium pass
Mtru06G0006020.1 Alkaloid 7DLGT medium pass
Mtru06G0006330.1 Alkaloid 7DLGT low borderline
Mtru06G0010880.1 Alkaloid 7DLGT high pass
Mtru06G0014200.1 Alkaloid 7DLGT medium pass
Mtru06G0014210.1 Alkaloid 7DLGT medium pass
Mtru06G0014230.1 Alkaloid 7DLGT medium pass
Mtru06G0014250.1 Alkaloid 7DLGT medium pass
Mtru06G0014300.1 Alkaloid 7DLGT medium pass
Mtru06G0015700.1 Alkaloid 7DLGT low borderline
Mtru06G0015710.1 Alkaloid 7DLGT low borderline
Mtru06G0015740.1 Alkaloid 7DLGT low borderline
Mtru06G0016010.1 Alkaloid 7DLGT low borderline
Mtru06G0016910.1 Alkaloid 7DLGT medium pass
Mtru06G0016920.1 Alkaloid 7DLGT high pass
Mtru06G0016930.1 Alkaloid 7DLGT medium pass
Mtru06G0016940.1 Alkaloid 7DLGT medium pass
Mtru06G0016980.1 Alkaloid 7DLGT medium pass
Mtru06G0018160.1 Alkaloid 7DLGT low borderline
Mtru06G0021720.1 Alkaloid 7DLGT low borderline
Mtru06G0031680.1 Alkaloid 7DLGT low borderline
Mtru06G0036290.1 Alkaloid 7DLGT high pass
Mtru07G0003710.1 Alkaloid 7DLGT medium pass
Mtru07G0003710.2 Alkaloid 7DLGT medium pass
Mtru07G0004210.1 Alkaloid 7DLGT low borderline
Mtru07G0004700.1 Alkaloid 7DLGT medium pass
Mtru07G0004700.2 Alkaloid 7DLGT low borderline
Mtru07G0004710.1 Alkaloid 7DLGT high pass
Mtru07G0004720.1 Alkaloid 7DLGT medium pass
Mtru07G0004730.1 Alkaloid 7DLGT high pass
Mtru07G0004740.1 Alkaloid 7DLGT high pass
Mtru07G0016260.1 Alkaloid 7DLGT low borderline
Mtru07G0017540.1 Alkaloid 7DLGT high pass
Mtru07G0017600.1 Alkaloid 7DLGT low borderline
Mtru07G0017610.1 Alkaloid 7DLGT low borderline
Mtru07G0020280.1 Alkaloid 7DLGT low borderline