PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Mtru01G0005210.1 Alkaloid 7DLH low borderline
Mtru01G0015730.1 Alkaloid 7DLH low borderline
Mtru01G0017260.1 Alkaloid 7DLH medium borderline
Mtru01G0017320.1 Alkaloid 7DLH medium borderline
Mtru01G0017380.1 Alkaloid 7DLH medium borderline
Mtru01G0017390.1 Alkaloid 7DLH medium borderline
Mtru01G0017410.1 Alkaloid 7DLH medium borderline
Mtru01G0017430.1 Alkaloid 7DLH medium borderline
Mtru01G0017460.1 Alkaloid 7DLH medium borderline
Mtru01G0017480.1 Alkaloid 7DLH medium borderline
Mtru01G0017500.1 Alkaloid 7DLH medium borderline
Mtru01G0017550.1 Alkaloid 7DLH medium borderline
Mtru01G0017590.1 Alkaloid 7DLH medium borderline
Mtru01G0024970.1 Alkaloid 7DLH medium borderline
Mtru01G0035910.1 Alkaloid 7DLH medium borderline
Mtru01G0036590.1 Alkaloid 7DLH medium borderline
Mtru01G0056390.1 Alkaloid 7DLH medium borderline
Mtru01G0056400.1 Alkaloid 7DLH medium borderline
Mtru02G0012210.2 Alkaloid 7DLH medium borderline
Mtru02G0030680.1 Alkaloid 7DLH medium borderline
Mtru02G0030710.1 Alkaloid 7DLH medium borderline
Mtru02G0033180.1 Alkaloid 7DLH medium borderline
Mtru02G0038010.1 Alkaloid 7DLH medium borderline
Mtru02G0038020.1 Alkaloid 7DLH medium borderline
Mtru02G0038030.1 Alkaloid 7DLH medium borderline
Mtru02G0038040.1 Alkaloid 7DLH medium borderline
Mtru02G0038050.1 Alkaloid 7DLH medium borderline
Mtru02G0038050.2 Alkaloid 7DLH medium borderline
Mtru02G0038060.1 Alkaloid 7DLH medium borderline
Mtru02G0038080.1 Alkaloid 7DLH medium borderline
Mtru03G0026580.1 Alkaloid 7DLH medium borderline
Mtru03G0040160.1 Alkaloid 7DLH medium borderline
Mtru03G0050130.1 Alkaloid 7DLH medium borderline
Mtru04G0004390.1 Alkaloid 7DLH medium borderline
Mtru05G0003450.1 Alkaloid 7DLH medium borderline
Mtru05G0003450.3 Alkaloid 7DLH medium borderline
Mtru05G0037860.1 Alkaloid 7DLH medium borderline
Mtru05G0055250.1 Alkaloid 7DLH medium borderline
Mtru05G0055250.2 Alkaloid 7DLH medium borderline
Mtru06G0000530.1 Alkaloid 7DLH medium borderline
Mtru06G0000580.1 Alkaloid 7DLH medium borderline
Mtru06G0018610.1 Alkaloid 7DLH low borderline
Mtru06G0022110.1 Alkaloid 7DLH low borderline
Mtru06G0029260.1 Alkaloid 7DLH medium borderline
Mtru06G0034070.1 Alkaloid 7DLH low borderline
Mtru07G0001380.1 Alkaloid 7DLH low borderline
Mtru07G0014170.1 Alkaloid 7DLH medium borderline
Mtru07G0014180.1 Alkaloid 7DLH medium borderline
Mtru07G0048350.1 Alkaloid 7DLH medium borderline
Mtru07G0048350.2 Alkaloid 7DLH medium borderline