PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Mtru03G0028010.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru03G0039030.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0004390.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0011550.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0014170.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0014170.2 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0025060.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0027580.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0035430.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0043710.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0043740.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0054720.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru04G0070760.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0010050.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0010360.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0010370.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0027080.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0037860.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0038330.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0038410.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0038420.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0038470.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0039900.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0039960.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0041230.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054210.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054650.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054660.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054670.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054670.2 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054730.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054820.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0054830.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru05G0055240.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru06G0000530.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru06G0000540.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru06G0000560.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru06G0000580.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru06G0015540.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru06G0015630.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru06G0024870.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru07G0004500.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru07G0011570.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru07G0011590.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru07G0014170.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru07G0014180.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru07G0032160.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru07G0051660.1 Steroid BR6OX2/CYP85A2 medium borderline
Mtru08G0012520.1 Steroid BR6OX2/CYP85A2 low borderline
Mtru08G0014950.1 Steroid BR6OX2/CYP85A2 low borderline