PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Mtru04G0011570.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0011580.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0011590.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0011600.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0011630.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0011660.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0013410.1 Steroid DWF4/CYP90B1 medium borderline
Mtru04G0015640.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0023600.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0036620.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0042280.1 Steroid DWF4/CYP90B1 medium borderline
Mtru04G0043980.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0043990.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0044010.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0049550.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0049560.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0050230.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0054670.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0057620.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0063300.1 Steroid DWF4/CYP90B1 low borderline
Mtru04G0072310.1 Steroid DWF4/CYP90B1 medium borderline
Mtru05G0003450.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0003450.2 Steroid DWF4/CYP90B1 low borderline
Mtru05G0003450.3 Steroid DWF4/CYP90B1 low borderline
Mtru05G0003450.4 Steroid DWF4/CYP90B1 low borderline
Mtru05G0007310.1 Steroid DWF4/CYP90B1 medium borderline
Mtru05G0007320.1 Steroid DWF4/CYP90B1 medium borderline
Mtru05G0007330.1 Steroid DWF4/CYP90B1 medium borderline
Mtru05G0008620.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0008630.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0010350.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0010490.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0013640.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0015110.1 Steroid DWF4/CYP90B1 medium borderline
Mtru05G0015110.2 Steroid DWF4/CYP90B1 medium borderline
Mtru05G0015810.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0021020.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0027400.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0038320.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0038350.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0038370.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0038400.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0038430.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0038440.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0039490.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0039710.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0039750.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0039780.1 Steroid DWF4/CYP90B1 low borderline
Mtru05G0052600.1 Steroid DWF4/CYP90B1 medium borderline
Mtru05G0054710.1 Steroid DWF4/CYP90B1 low borderline