PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0031360.1 Steroid DWF4/CYP90B1 low borderline
Mtru08G0040370.1 Steroid DWF4/CYP90B1 medium borderline
Mtru08G0045970.1 Steroid DWF4/CYP90B1 medium borderline
Mtru08G0045970.2 Steroid DWF4/CYP90B1 medium borderline
Mtru08G0047710.1 Steroid DWF4/CYP90B1 low borderline
Mtru08G0047720.1 Steroid DWF4/CYP90B1 low borderline
Mtru08G0051770.1 Steroid DWF4/CYP90B1 low borderline
Mtru08G0053590.1 Steroid DWF4/CYP90B1 medium borderline
Mtru08G0053590.2 Steroid DWF4/CYP90B1 medium borderline
Mtruscaffold00250004470.1 Steroid DWF4/CYP90B1 low borderline
Mtruscaffold01710012250.1 Steroid DWF4/CYP90B1 low borderline
Mtruscaffold01810012560.1 Steroid DWF4/CYP90B1 low borderline
Mtruscaffold02870015020.1 Steroid DWF4/CYP90B1 low borderline
Mtruscaffold04510017810.1 Steroid DWF4/CYP90B1 low borderline
Mtruscaffold06080019450.1 Steroid DWF4/CYP90B1 low borderline
Mtruscaffold06380019680.1 Steroid DWF4/CYP90B1 low borderline