PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Mtru07G0021160.1 Flavonoid F3H medium borderline
Mtru07G0021180.1 Flavonoid F3H medium borderline
Mtru07G0021260.1 Flavonoid F3H medium borderline
Mtru07G0024830.1 Flavonoid F3H medium borderline
Mtru07G0024840.1 Flavonoid F3H medium borderline
Mtru07G0024850.1 Flavonoid F3H medium borderline
Mtru07G0024860.1 Flavonoid F3H medium borderline
Mtru07G0024870.1 Flavonoid F3H medium borderline
Mtru07G0025550.1 Flavonoid F3H medium borderline
Mtru07G0028070.1 Flavonoid F3H medium borderline
Mtru07G0034090.1 Flavonoid F3H medium borderline
Mtru07G0034090.2 Flavonoid F3H medium borderline
Mtru07G0036720.1 Flavonoid F3H medium borderline
Mtru07G0038650.1 Flavonoid F3H medium pass
Mtru07G0042940.1 Flavonoid F3H low borderline
Mtru07G0051290.1 Flavonoid F3H medium borderline
Mtru07G0051390.1 Flavonoid F3H medium borderline
Mtru07G0052670.1 Flavonoid F3H medium borderline
Mtru08G0001340.1 Flavonoid F3H medium borderline
Mtru08G0002600.1 Flavonoid F3H medium borderline
Mtru08G0002720.1 Flavonoid F3H medium borderline
Mtru08G0002720.2 Flavonoid F3H medium borderline
Mtru08G0002720.3 Flavonoid F3H medium borderline
Mtru08G0002730.1 Flavonoid F3H medium borderline
Mtru08G0002730.2 Flavonoid F3H medium borderline
Mtru08G0002740.1 Flavonoid F3H medium borderline
Mtru08G0002750.1 Flavonoid F3H medium borderline
Mtru08G0002780.1 Flavonoid F3H medium borderline
Mtru08G0002790.1 Flavonoid F3H medium borderline
Mtru08G0002790.2 Flavonoid F3H medium borderline
Mtru08G0002800.1 Flavonoid F3H medium borderline
Mtru08G0011980.1 Flavonoid F3H medium borderline
Mtru08G0011980.2 Flavonoid F3H medium borderline
Mtru08G0014210.1 Flavonoid F3H medium borderline
Mtru08G0015170.1 Flavonoid F3H low borderline
Mtru08G0017050.1 Flavonoid F3H medium borderline
Mtru08G0020450.1 Flavonoid F3H medium borderline
Mtru08G0020450.2 Flavonoid F3H medium borderline
Mtru08G0020470.1 Flavonoid F3H medium borderline
Mtru08G0029730.1 Flavonoid F3H medium borderline
Mtru08G0030880.1 Flavonoid F3H medium borderline
Mtru08G0031190.1 Flavonoid F3H medium borderline
Mtru08G0031990.1 Flavonoid F3H medium borderline
Mtru08G0031990.2 Flavonoid F3H medium borderline
Mtru08G0031990.3 Flavonoid F3H medium borderline
Mtru08G0031990.4 Flavonoid F3H medium borderline
Mtru08G0037800.1 Flavonoid F3H medium borderline
Mtru08G0037810.1 Flavonoid F3H medium borderline
Mtru08G0037810.2 Flavonoid F3H medium borderline
Mtru08G0038960.1 Flavonoid F3H medium borderline