PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Mtru01G0002720.1 Alkaloid H6H medium pass
Mtru01G0002730.1 Alkaloid H6H low borderline
Mtru01G0015200.1 Alkaloid H6H low borderline
Mtru01G0015210.1 Alkaloid H6H low borderline
Mtru01G0016550.1 Alkaloid H6H medium borderline
Mtru01G0021620.1 Alkaloid H6H medium pass
Mtru01G0021620.2 Alkaloid H6H low borderline
Mtru01G0021640.2 Alkaloid H6H low borderline
Mtru01G0021650.1 Alkaloid H6H medium pass
Mtru01G0021650.2 Alkaloid H6H low borderline
Mtru01G0037070.1 Alkaloid H6H medium borderline
Mtru01G0037080.1 Alkaloid H6H medium borderline
Mtru01G0037080.2 Alkaloid H6H medium borderline
Mtru01G0037080.3 Alkaloid H6H medium borderline
Mtru01G0037090.1 Alkaloid H6H medium borderline
Mtru01G0037100.1 Alkaloid H6H medium borderline
Mtru01G0037120.1 Alkaloid H6H medium borderline
Mtru01G0037130.1 Alkaloid H6H medium borderline
Mtru01G0037130.2 Alkaloid H6H medium borderline
Mtru01G0037210.1 Alkaloid H6H medium pass
Mtru01G0038200.1 Alkaloid H6H low borderline
Mtru01G0041040.1 Alkaloid H6H medium borderline
Mtru01G0041460.1 Alkaloid H6H low borderline
Mtru01G0047670.1 Alkaloid H6H low borderline
Mtru02G0012810.2 Alkaloid H6H low borderline
Mtru02G0017660.1 Alkaloid H6H low borderline
Mtru02G0020290.1 Alkaloid H6H medium borderline
Mtru02G0020290.2 Alkaloid H6H medium borderline
Mtru02G0036000.1 Alkaloid H6H low borderline
Mtru02G0036070.1 Alkaloid H6H medium borderline
Mtru02G0036150.2 Alkaloid H6H high pass
Mtru02G0036180.1 Alkaloid H6H low borderline
Mtru02G0038450.2 Alkaloid H6H medium borderline
Mtru03G0005560.1 Alkaloid H6H low borderline
Mtru03G0015990.1 Alkaloid H6H medium borderline
Mtru03G0024190.1 Alkaloid H6H medium borderline
Mtru03G0036320.1 Alkaloid H6H medium borderline
Mtru03G0043060.1 Alkaloid H6H medium borderline
Mtru03G0043060.2 Alkaloid H6H medium pass
Mtru03G0047000.1 Alkaloid H6H medium borderline
Mtru03G0047240.1 Alkaloid H6H low borderline
Mtru03G0049680.1 Alkaloid H6H medium borderline
Mtru03G0059910.1 Alkaloid H6H low borderline
Mtru03G0066740.1 Alkaloid H6H low borderline
Mtru04G0004010.1 Alkaloid H6H low borderline
Mtru04G0004020.1 Alkaloid H6H low borderline
Mtru04G0004020.2 Alkaloid H6H low borderline
Mtru04G0009180.1 Alkaloid H6H low borderline
Mtru04G0009190.1 Alkaloid H6H low borderline
Mtru04G0012080.1 Alkaloid H6H low borderline