PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Protein/Isoform Record Pathway Family Confidence Status
Mtru01G0020130.1 Alkaloid PYKS low borderline
Mtru01G0041360.1 Alkaloid PYKS low borderline
Mtru01G0054650.1 Alkaloid PYKS high pass
Mtru01G0054660.1 Alkaloid PYKS high pass
Mtru01G0054670.1 Alkaloid PYKS high pass
Mtru01G0063070.1 Alkaloid PYKS low borderline
Mtru01G0066030.1 Alkaloid PYKS low borderline
Mtru02G0001060.1 Alkaloid PYKS low borderline
Mtru02G0005600.1 Alkaloid PYKS low borderline
Mtru02G0019660.1 Alkaloid PYKS low borderline
Mtru02G0030510.1 Alkaloid PYKS low borderline
Mtru02G0031180.1 Alkaloid PYKS high pass
Mtru02G0052030.1 Alkaloid PYKS low borderline
Mtru02G0058150.1 Alkaloid PYKS low borderline
Mtru03G0043480.1 Alkaloid PYKS high pass
Mtru03G0043490.1 Alkaloid PYKS high pass
Mtru03G0045200.1 Alkaloid PYKS high pass
Mtru03G0047130.1 Alkaloid PYKS high pass
Mtru03G0047140.1 Alkaloid PYKS high pass
Mtru03G0058260.1 Alkaloid PYKS low borderline
Mtru04G0001180.1 Alkaloid PYKS low borderline
Mtru04G0023240.1 Alkaloid PYKS low borderline
Mtru04G0023370.1 Alkaloid PYKS low borderline
Mtru04G0023440.1 Alkaloid PYKS low borderline
Mtru04G0023470.1 Alkaloid PYKS low borderline
Mtru04G0027390.1 Alkaloid PYKS low borderline
Mtru04G0027400.1 Alkaloid PYKS low borderline
Mtru04G0027420.1 Alkaloid PYKS low borderline
Mtru04G0032090.1 Alkaloid PYKS low borderline
Mtru04G0035730.1 Alkaloid PYKS high pass
Mtru04G0037850.1 Alkaloid PYKS high pass
Mtru04G0059080.1 Alkaloid PYKS low borderline
Mtru05G0002370.1 Alkaloid PYKS high pass
Mtru05G0002380.1 Alkaloid PYKS high pass
Mtru05G0002390.1 Alkaloid PYKS high pass
Mtru05G0002400.1 Alkaloid PYKS high pass
Mtru05G0002410.1 Alkaloid PYKS high pass
Mtru05G0002430.1 Alkaloid PYKS high pass
Mtru05G0002440.1 Alkaloid PYKS medium pass
Mtru05G0030650.1 Alkaloid PYKS low borderline
Mtru06G0013340.1 Alkaloid PYKS low borderline
Mtru06G0030050.1 Alkaloid PYKS low borderline
Mtru07G0006340.1 Alkaloid PYKS high pass
Mtru07G0006360.1 Alkaloid PYKS high pass
Mtru07G0006370.1 Alkaloid PYKS high pass
Mtru07G0006390.1 Alkaloid PYKS high pass
Mtru07G0006400.1 Alkaloid PYKS high pass
Mtru07G0036890.1 Alkaloid PYKS low borderline
Mtru07G0038600.1 Alkaloid PYKS high pass
Mtru07G0058400.1 Alkaloid PYKS high pass