PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Mtru01G0005220.2 Alkaloid T3O low borderline
Mtru01G0007470.1 Alkaloid T3O medium pass
Mtru01G0010110.1 Alkaloid T3O medium borderline
Mtru01G0010130.1 Alkaloid T3O medium borderline
Mtru01G0010140.1 Alkaloid T3O medium borderline
Mtru01G0015710.1 Alkaloid T3O medium pass
Mtru01G0016690.1 Alkaloid T3O low borderline
Mtru01G0016700.1 Alkaloid T3O low borderline
Mtru01G0016890.1 Alkaloid T3O medium borderline
Mtru01G0016910.1 Alkaloid T3O medium borderline
Mtru01G0017420.1 Alkaloid T3O low borderline
Mtru01G0017620.1 Alkaloid T3O low borderline
Mtru01G0018350.1 Alkaloid T3O low borderline
Mtru01G0018360.1 Alkaloid T3O medium pass
Mtru01G0018380.1 Alkaloid T3O medium pass
Mtru01G0018920.1 Alkaloid T3O low borderline
Mtru01G0020990.1 Alkaloid T3O medium borderline
Mtru01G0025590.1 Alkaloid T3O low borderline
Mtru01G0032010.1 Alkaloid T3O low borderline
Mtru01G0037420.1 Alkaloid T3O medium pass
Mtru01G0037460.1 Alkaloid T3O medium pass
Mtru01G0037470.1 Alkaloid T3O low borderline
Mtru01G0051000.1 Alkaloid T3O medium borderline
Mtru01G0051030.1 Alkaloid T3O medium borderline
Mtru01G0051040.1 Alkaloid T3O medium borderline
Mtru01G0051060.1 Alkaloid T3O medium borderline
Mtru01G0054220.1 Alkaloid T3O medium borderline
Mtru01G0057550.1 Alkaloid T3O low borderline
Mtru01G0058630.1 Alkaloid T3O medium borderline
Mtru01G0058640.1 Alkaloid T3O medium borderline
Mtru01G0061020.1 Alkaloid T3O medium borderline
Mtru01G0061030.1 Alkaloid T3O medium borderline
Mtru02G0003530.1 Alkaloid T3O medium borderline
Mtru02G0009430.1 Alkaloid T3O low borderline
Mtru02G0020640.1 Alkaloid T3O medium borderline
Mtru02G0029230.1 Alkaloid T3O medium borderline
Mtru02G0029230.2 Alkaloid T3O medium borderline
Mtru02G0034720.1 Alkaloid T3O medium borderline
Mtru02G0038810.1 Alkaloid T3O medium borderline
Mtru02G0038830.1 Alkaloid T3O medium borderline
Mtru02G0053060.1 Alkaloid T3O medium borderline
Mtru03G0001270.1 Alkaloid T3O medium pass
Mtru03G0004400.1 Alkaloid T3O low borderline
Mtru03G0004400.2 Alkaloid T3O medium pass
Mtru03G0005530.1 Alkaloid T3O medium borderline
Mtru03G0009120.1 Alkaloid T3O medium borderline
Mtru03G0009140.1 Alkaloid T3O medium borderline
Mtru03G0023630.1 Alkaloid T3O medium borderline
Mtru03G0023690.1 Alkaloid T3O medium borderline
Mtru03G0023710.1 Alkaloid T3O medium borderline