PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Mtru03G0023720.1 Alkaloid T3O medium borderline
Mtru03G0023740.1 Alkaloid T3O medium borderline
Mtru03G0023750.1 Alkaloid T3O medium borderline
Mtru03G0023780.1 Alkaloid T3O medium borderline
Mtru03G0023790.1 Alkaloid T3O medium borderline
Mtru03G0023810.1 Alkaloid T3O medium borderline
Mtru03G0023830.1 Alkaloid T3O medium borderline
Mtru03G0023850.1 Alkaloid T3O medium borderline
Mtru03G0023890.1 Alkaloid T3O medium borderline
Mtru03G0023900.1 Alkaloid T3O medium borderline
Mtru03G0023910.1 Alkaloid T3O medium borderline
Mtru03G0023920.1 Alkaloid T3O medium borderline
Mtru03G0023930.1 Alkaloid T3O medium borderline
Mtru03G0023990.1 Alkaloid T3O medium borderline
Mtru03G0024000.1 Alkaloid T3O medium borderline
Mtru03G0024010.1 Alkaloid T3O medium borderline
Mtru03G0029680.1 Alkaloid T3O medium pass
Mtru03G0029680.2 Alkaloid T3O medium pass
Mtru03G0034690.1 Alkaloid T3O medium pass
Mtru03G0038480.1 Alkaloid T3O medium borderline
Mtru03G0038500.1 Alkaloid T3O medium borderline
Mtru03G0038510.1 Alkaloid T3O medium borderline
Mtru03G0039030.1 Alkaloid T3O medium borderline
Mtru03G0063530.1 Alkaloid T3O medium pass
Mtru04G0007690.1 Alkaloid T3O medium borderline
Mtru04G0011550.1 Alkaloid T3O medium borderline
Mtru04G0011570.1 Alkaloid T3O medium borderline
Mtru04G0011580.1 Alkaloid T3O medium borderline
Mtru04G0011590.1 Alkaloid T3O medium borderline
Mtru04G0011600.1 Alkaloid T3O medium borderline
Mtru04G0011630.1 Alkaloid T3O medium borderline
Mtru04G0011660.1 Alkaloid T3O medium borderline
Mtru04G0020190.1 Alkaloid T3O medium borderline
Mtru04G0023600.1 Alkaloid T3O medium pass
Mtru04G0025060.1 Alkaloid T3O medium borderline
Mtru04G0027560.1 Alkaloid T3O medium borderline
Mtru04G0033150.1 Alkaloid T3O medium borderline
Mtru04G0035430.1 Alkaloid T3O medium pass
Mtru04G0036620.1 Alkaloid T3O medium borderline
Mtru04G0037270.1 Alkaloid T3O medium borderline
Mtru04G0042280.1 Alkaloid T3O medium pass
Mtru04G0042320.1 Alkaloid T3O medium pass
Mtru04G0043700.1 Alkaloid T3O medium borderline
Mtru04G0043740.1 Alkaloid T3O medium borderline
Mtru04G0043980.1 Alkaloid T3O medium borderline
Mtru04G0044010.1 Alkaloid T3O medium borderline
Mtru04G0044020.1 Alkaloid T3O medium borderline
Mtru04G0044940.1 Alkaloid T3O medium borderline
Mtru04G0050230.1 Alkaloid T3O medium borderline
Mtru04G0053350.1 Alkaloid T3O medium borderline