PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Mtru05G0054670.1 Alkaloid T3O medium borderline
Mtru05G0054670.2 Alkaloid T3O medium borderline
Mtru05G0054700.1 Alkaloid T3O medium borderline
Mtru05G0054710.1 Alkaloid T3O medium borderline
Mtru05G0054720.1 Alkaloid T3O medium borderline
Mtru05G0054730.1 Alkaloid T3O medium borderline
Mtru05G0054790.1 Alkaloid T3O medium pass
Mtru05G0054820.1 Alkaloid T3O medium borderline
Mtru05G0054970.1 Alkaloid T3O medium borderline
Mtru05G0055240.1 Alkaloid T3O medium borderline
Mtru05G0055280.1 Alkaloid T3O medium borderline
Mtru05G0055310.1 Alkaloid T3O medium borderline
Mtru06G0000540.1 Alkaloid T3O low borderline
Mtru06G0000550.1 Alkaloid T3O low borderline
Mtru06G0000560.1 Alkaloid T3O low borderline
Mtru06G0003020.1 Alkaloid T3O medium borderline
Mtru06G0003060.1 Alkaloid T3O medium borderline
Mtru06G0003080.1 Alkaloid T3O medium borderline
Mtru06G0003110.1 Alkaloid T3O medium borderline
Mtru06G0003140.1 Alkaloid T3O medium borderline
Mtru06G0003150.1 Alkaloid T3O medium borderline
Mtru06G0007280.1 Alkaloid T3O medium pass
Mtru06G0010270.1 Alkaloid T3O medium borderline
Mtru06G0015540.1 Alkaloid T3O medium borderline
Mtru06G0015620.1 Alkaloid T3O medium borderline
Mtru06G0018240.1 Alkaloid T3O medium borderline
Mtru06G0018270.1 Alkaloid T3O medium borderline
Mtru06G0024870.1 Alkaloid T3O medium borderline
Mtru06G0034610.1 Alkaloid T3O medium borderline
Mtru07G0004500.1 Alkaloid T3O medium borderline
Mtru07G0004520.1 Alkaloid T3O medium borderline
Mtru07G0006070.1 Alkaloid T3O medium pass
Mtru07G0006070.2 Alkaloid T3O low borderline
Mtru07G0011570.1 Alkaloid T3O medium borderline
Mtru07G0011590.1 Alkaloid T3O medium borderline
Mtru07G0012570.1 Alkaloid T3O low borderline
Mtru07G0013730.1 Alkaloid T3O medium pass
Mtru07G0020770.1 Alkaloid T3O medium borderline
Mtru07G0032160.1 Alkaloid T3O medium borderline
Mtru07G0032180.1 Alkaloid T3O medium borderline
Mtru07G0032210.1 Alkaloid T3O medium borderline
Mtru07G0032230.1 Alkaloid T3O medium borderline
Mtru07G0032240.1 Alkaloid T3O medium borderline
Mtru07G0035140.1 Alkaloid T3O medium pass
Mtru07G0035140.2 Alkaloid T3O medium pass
Mtru07G0041320.1 Alkaloid T3O low borderline
Mtru07G0044470.1 Alkaloid T3O medium borderline
Mtru07G0047070.1 Alkaloid T3O medium pass
Mtru07G0047090.1 Alkaloid T3O medium pass
Mtru08G0005220.1 Alkaloid T3O medium borderline