PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0005230.1 Alkaloid T3O medium borderline
Mtru08G0008000.1 Alkaloid T3O medium borderline
Mtru08G0010270.1 Alkaloid T3O medium borderline
Mtru08G0010280.1 Alkaloid T3O medium borderline
Mtru08G0010290.1 Alkaloid T3O medium borderline
Mtru08G0012520.1 Alkaloid T3O medium borderline
Mtru08G0023010.1 Alkaloid T3O medium borderline
Mtru08G0023040.1 Alkaloid T3O medium borderline
Mtru08G0023740.1 Alkaloid T3O low borderline
Mtru08G0027930.1 Alkaloid T3O medium borderline
Mtru08G0029390.1 Alkaloid T3O medium borderline
Mtru08G0029680.1 Alkaloid T3O medium borderline
Mtru08G0036730.1 Alkaloid T3O medium pass
Mtru08G0036730.2 Alkaloid T3O low borderline
Mtru08G0036730.3 Alkaloid T3O low borderline
Mtru08G0036730.4 Alkaloid T3O medium pass
Mtru08G0039260.1 Alkaloid T3O medium borderline
Mtru08G0039430.1 Alkaloid T3O medium pass
Mtru08G0045970.1 Alkaloid T3O medium pass
Mtru08G0046570.1 Alkaloid T3O medium pass
Mtru08G0047710.1 Alkaloid T3O medium borderline
Mtru08G0047720.1 Alkaloid T3O medium borderline
Mtru08G0053590.1 Alkaloid T3O medium pass
Mtru08G0055510.1 Alkaloid T3O medium borderline
Mtru08G0055530.1 Alkaloid T3O medium borderline
Mtruscaffold00220003990.1 Alkaloid T3O medium borderline
Mtruscaffold00250004470.1 Alkaloid T3O medium pass
Mtruscaffold00450006390.1 Alkaloid T3O medium pass
Mtruscaffold00450006390.2 Alkaloid T3O medium pass
Mtruscaffold00450006400.1 Alkaloid T3O medium pass
Mtruscaffold00450006400.2 Alkaloid T3O medium pass
Mtruscaffold00450006420.1 Alkaloid T3O low borderline
Mtruscaffold00590007640.1 Alkaloid T3O medium borderline
Mtruscaffold01710012240.1 Alkaloid T3O medium borderline
Mtruscaffold01710012250.1 Alkaloid T3O medium borderline
Mtruscaffold01710012260.1 Alkaloid T3O medium borderline
Mtruscaffold01810012560.1 Alkaloid T3O medium borderline
Mtruscaffold02870015020.1 Alkaloid T3O medium borderline
Mtruscaffold04510017810.1 Alkaloid T3O medium borderline
Mtruscaffold05540018910.1 Alkaloid T3O medium borderline
Mtruscaffold06380019680.1 Alkaloid T3O medium borderline