PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
Mtru01G0045060.1 Alkaloid TRI/TRII low borderline
Mtru01G0056140.1 Alkaloid TRI/TRII low borderline
Mtru01G0056140.2 Alkaloid TRI/TRII low borderline
Mtru01G0056140.3 Alkaloid TRI/TRII low borderline
Mtru02G0038820.1 Alkaloid TRI/TRII low borderline
Mtru02G0048340.1 Alkaloid TRI/TRII medium pass
Mtru03G0007320.1 Alkaloid TRI/TRII medium pass
Mtru03G0033480.1 Alkaloid TRI/TRII medium pass
Mtru03G0033490.1 Alkaloid TRI/TRII medium pass
Mtru03G0033500.1 Alkaloid TRI/TRII medium pass
Mtru03G0033510.1 Alkaloid TRI/TRII medium pass
Mtru03G0033610.1 Alkaloid TRI/TRII medium pass
Mtru03G0033650.1 Alkaloid TRI/TRII medium pass
Mtru03G0033650.2 Alkaloid TRI/TRII medium pass
Mtru03G0038980.1 Alkaloid TRI/TRII low borderline
Mtru03G0040200.1 Alkaloid TRI/TRII low borderline
Mtru03G0044820.1 Alkaloid TRI/TRII medium pass
Mtru03G0046320.1 Alkaloid TRI/TRII low borderline
Mtru03G0046330.1 Alkaloid TRI/TRII low borderline
Mtru03G0064310.1 Alkaloid TRI/TRII medium pass
Mtru04G0022370.1 Alkaloid TRI/TRII medium pass
Mtru04G0022380.1 Alkaloid TRI/TRII medium pass
Mtru04G0022400.1 Alkaloid TRI/TRII medium pass
Mtru04G0022410.1 Alkaloid TRI/TRII medium pass
Mtru04G0029030.1 Alkaloid TRI/TRII medium pass
Mtru04G0029030.2 Alkaloid TRI/TRII medium pass
Mtru04G0029040.1 Alkaloid TRI/TRII medium pass
Mtru04G0029040.2 Alkaloid TRI/TRII medium pass
Mtru04G0037790.1 Alkaloid TRI/TRII medium pass
Mtru04G0041630.1 Alkaloid TRI/TRII medium pass
Mtru04G0042510.1 Alkaloid TRI/TRII medium borderline
Mtru04G0042510.2 Alkaloid TRI/TRII medium borderline
Mtru04G0042520.1 Alkaloid TRI/TRII medium borderline
Mtru04G0042520.2 Alkaloid TRI/TRII medium borderline
Mtru04G0042520.3 Alkaloid TRI/TRII medium borderline
Mtru04G0043090.1 Alkaloid TRI/TRII low borderline
Mtru04G0070670.1 Alkaloid TRI/TRII low borderline
Mtru04G0071620.1 Alkaloid TRI/TRII medium pass
Mtru05G0057750.1 Alkaloid TRI/TRII low borderline
Mtru06G0010820.1 Alkaloid TRI/TRII medium pass
Mtru06G0010830.1 Alkaloid TRI/TRII medium pass
Mtru06G0010830.2 Alkaloid TRI/TRII medium pass
Mtru06G0010840.1 Alkaloid TRI/TRII medium pass
Mtru06G0010870.1 Alkaloid TRI/TRII medium pass
Mtru06G0010890.1 Alkaloid TRI/TRII medium pass
Mtru06G0010930.1 Alkaloid TRI/TRII medium pass
Mtru06G0015820.1 Alkaloid TRI/TRII medium pass
Mtru07G0025230.1 Alkaloid TRI/TRII medium pass
Mtru07G0025240.1 Alkaloid TRI/TRII medium pass
Mtru07G0025240.2 Alkaloid TRI/TRII medium pass