Medicago truncatula (medicago_truncatula)
Imported from atlas release summary for Medicago truncatula.
2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2701
Candidate Genes
C3'H/CYP98A
5.86%
C4H
5.73%
BAHD
5.26%
UGT
4.76%
7DLGT
4.39%
UFGT
4.31%
IFS
3.74%
T3O
3.55%
Other Families
62.41%
More Families (98)
4CL
240
3.53%
POD
229
3.37%
CYP76
224
3.3%
F3H
219
3.22%
NMT
195
2.87%
DWF4/CYP90B1
166
2.44%
F3'H/CYP75B
142
2.09%
CODM/T6ODM
141
2.08%
BR6OX2/CYP85A2
116
1.71%
STR
106
1.56%
CAD
106
1.56%
SMT1/SMT2/SMT3
102
1.5%
H6H
101
1.49%
CYP71
101
1.49%
CAS
93
1.37%
SGD
88
1.3%
TRI/TRII
74
1.09%
COMT
74
1.09%
TPS
68
1.0%
HCT
60
0.88%
CYP90D1
59
0.87%
7DLH
58
0.85%
GES
56
0.82%
ANR
55
0.81%
IFR
55
0.81%
PYKS
52
0.77%
CSE
51
0.75%
GS
50
0.74%
G8O/G8H
48
0.71%
RAS
48
0.71%
LAC
47
0.69%
SLS
42
0.62%
PMT
41
0.6%
T16H
41
0.6%
16OMT
40
0.59%
F3'5'H/CYP75A
40
0.59%
FNS
39
0.57%
CCR
38
0.56%
BBE
35
0.52%
BR6OX1/CYP85A1
34
0.5%
IO
31
0.46%
NCS
30
0.44%
CYP51G1
30
0.44%
COR
29
0.43%
F5H/CYP84A
29
0.43%
CHS
26
0.38%
DFR
25
0.37%
ANS/LDOX
24
0.35%
8HGO
23
0.34%
CPD/CYP90A1
23
0.34%
MPO
21
0.31%
PAL
21
0.31%
ROT3/CYP90C1
20
0.29%
LAMT
19
0.28%
CPR
19
0.28%
CCoAOMT
17
0.25%
TAT
17
0.25%
CNMT
16
0.24%
CYP80B1
15
0.22%
CHI
15
0.22%
SQS/FDFT1
15
0.22%
AACT
13
0.19%
HMGR
13
0.19%
ISY
11
0.16%
SQE
11
0.16%
DWF5
11
0.16%
CYP719
10
0.15%
HPPR
10
0.15%
FPPS
10
0.15%
DET2
9
0.13%
TDC
8
0.12%
SMO1/SMO2
8
0.12%
DXS
8
0.12%
TYDC_DDC
7
0.1%
MVK
7
0.1%
MVD
6
0.09%
MCT/IspD
6
0.09%
ADC
5
0.07%
DWF1
5
0.07%
GGPPS
5
0.07%
FLS
4
0.06%
HMGS
4
0.06%
XMT_MXMT_DXMT
3
0.04%
CPI1
3
0.04%
DWF7
3
0.04%
HDR/IspH
3
0.04%
DXR
3
0.04%
ODC
2
0.03%
HDS/IspG
2
0.03%
MDS/IspF
2
0.03%
6OMT_4OMT_SOMT
1
0.01%
CYP80F1
1
0.01%
FK
1
0.01%
HYD1
1
0.01%
CMK/IspE
1
0.01%
PMK
1
0.01%
GPPS
1
0.01%
IDI
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 776 | 20 | UGT (307) | View species results |
| Alkaloid pathway | 660 | 20 | 7DLGT (137) | View species results |
| Phenylpropanoid pathway | 501 | 12 | POD (218) | View species results |
| Flavonoid pathway | 400 | 11 | UFGT (277) | View species results |
| Rosmarinic acid pathway | 186 | 7 | C4H (81) | View species results |
| Steroid pathway | 178 | 12 | CAS (73) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2512 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 465 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mtru03G0013580.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Mtru03G0020190.1 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| Mtru03G0028470.1 | Terpenoid | UGT | low | borderline | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| Mtru03G0028490.1 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| Mtru03G0034120.1 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Mtru03G0034130.1 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Mtru03G0040280.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Mtru03G0040290.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Mtru03G0040310.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Mtru03G0040340.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Mtru03G0040350.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Mtru03G0040370.1 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Mtru03G0043910.1 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| Mtru03G0043920.1 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| Mtru03G0043930.1 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| Mtru04G0002240.1 | Terpenoid | UGT | medium | pass | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| Mtru04G0010750.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| Mtru04G0014190.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Mtru04G0025940.1 | Terpenoid | UGT | medium | pass | UGT__00037__sp_I1LCI8_FG2KO_SOYBN |
| Mtru04G0029170.1 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Mtru04G0029170.2 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Mtru04G0037230.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Mtru04G0038160.1 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Mtru04G0038180.1 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Mtru04G0038190.1 | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| Mtru04G0040350.1 | Terpenoid | UGT | medium | pass | UGT__00018__sp_A0A224AM54_708G1_CITJP |
| Mtru04G0040380.1 | Terpenoid | UGT | medium | pass | UGT__00036__sp_I1L3T1_708D1_SOYBN |
| Mtru04G0041910.1 | Terpenoid | UGT | medium | pass | UGT__00077__sp_Q8VZE9_U73B1_ARATH |
| Mtru04G0041930.1 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Mtru04G0041940.1 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Mtru04G0041950.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Mtru04G0047470.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Mtru04G0049950.1 | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| Mtru04G0050130.1 | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| Mtru04G0056840.1 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Mtru04G0062290.1 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Mtru04G0062310.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Mtru04G0062320.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Mtru04G0062330.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Mtru04G0062340.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Mtru04G0062360.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Mtru04G0065800.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Mtru04G0068680.1 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| Mtru04G0068700.1 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| Mtru05G0000220.1 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| Mtru05G0008660.1 | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| Mtru05G0008800.1 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Mtru05G0010690.1 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Mtru05G0010690.2 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Mtru05G0016310.1 | Terpenoid | UGT | low | borderline | UGT__00078__sp_Q8W491_U73B3_ARATH |