PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0029710.1 Flavonoid IFS low borderline
Mtru08G0036730.1 Flavonoid IFS low borderline
Mtru08G0036730.2 Flavonoid IFS low borderline
Mtru08G0036730.3 Flavonoid IFS low borderline
Mtru08G0036730.4 Flavonoid IFS low borderline
Mtru08G0038780.1 Flavonoid IFS medium borderline
Mtru08G0039260.1 Flavonoid IFS medium borderline
Mtru08G0039430.1 Flavonoid IFS low borderline
Mtru08G0039710.1 Flavonoid IFS low borderline
Mtru08G0039710.2 Flavonoid IFS low borderline
Mtru08G0039710.3 Flavonoid IFS low borderline
Mtru08G0039710.4 Flavonoid IFS low borderline
Mtru08G0040370.1 Flavonoid IFS low borderline
Mtru08G0045420.1 Flavonoid IFS low borderline
Mtru08G0045970.1 Flavonoid IFS low borderline
Mtru08G0046570.1 Flavonoid IFS low borderline
Mtru08G0047720.1 Flavonoid IFS medium borderline
Mtru08G0051690.1 Flavonoid IFS low borderline
Mtru08G0053590.1 Flavonoid IFS low borderline
Mtru08G0053590.2 Flavonoid IFS low borderline
Mtru08G0055510.1 Flavonoid IFS medium borderline
Mtru08G0055530.1 Flavonoid IFS medium borderline
Mtruscaffold00220003990.1 Flavonoid IFS medium borderline
Mtruscaffold00250004470.1 Flavonoid IFS low borderline
Mtruscaffold00450006390.1 Flavonoid IFS low borderline
Mtruscaffold00450006390.2 Flavonoid IFS low borderline
Mtruscaffold00590007640.1 Flavonoid IFS medium borderline
Mtruscaffold01550011830.1 Flavonoid IFS low borderline
Mtruscaffold01710012240.1 Flavonoid IFS medium borderline
Mtruscaffold01710012250.1 Flavonoid IFS medium borderline
Mtruscaffold01710012260.1 Flavonoid IFS medium borderline
Mtruscaffold01810012560.1 Flavonoid IFS medium borderline
Mtruscaffold04080017110.1 Flavonoid IFS medium borderline
Mtruscaffold04510017810.1 Flavonoid IFS medium borderline
Mtruscaffold04570017830.1 Flavonoid IFS low borderline
Mtruscaffold06080019450.1 Flavonoid IFS medium borderline
Mtruscaffold07270020570.1 Flavonoid IFS low borderline
Mtru01G0033910.1 Flavonoid PAL high pass
Mtru01G0052790.1 Flavonoid PAL high pass
Mtru02G0051270.1 Flavonoid PAL high pass
Mtru02G0051310.1 Flavonoid PAL medium pass
Mtru05G0057810.1 Flavonoid PAL high pass
Mtru07G0050470.1 Flavonoid PAL high pass
Mtru07G0050480.1 Flavonoid PAL high pass
Mtru01G0007560.1 Flavonoid UFGT medium pass
Mtru01G0007570.1 Flavonoid UFGT high pass
Mtru01G0013590.1 Flavonoid UFGT high pass
Mtru01G0015410.1 Flavonoid UFGT medium pass
Mtru01G0019560.1 Flavonoid UFGT medium pass
Mtru01G0033000.1 Flavonoid UFGT medium pass