PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Mtru03G0057830.1 Alkaloid 7DLGT low borderline
Mtru03G0057830.2 Alkaloid 7DLGT low borderline
Mtru03G0057850.1 Alkaloid 7DLGT low borderline
Mtru04G0002240.1 Alkaloid 7DLGT low borderline
Mtru04G0010750.1 Alkaloid 7DLGT medium pass
Mtru04G0014190.1 Alkaloid 7DLGT low borderline
Mtru04G0025940.1 Alkaloid 7DLGT low borderline
Mtru04G0029170.1 Alkaloid 7DLGT high pass
Mtru04G0029170.2 Alkaloid 7DLGT high pass
Mtru04G0037230.1 Alkaloid 7DLGT low borderline
Mtru04G0038160.1 Alkaloid 7DLGT low borderline
Mtru04G0038180.1 Alkaloid 7DLGT low borderline
Mtru04G0040350.1 Alkaloid 7DLGT low borderline
Mtru04G0040380.1 Alkaloid 7DLGT low borderline
Mtru04G0041910.1 Alkaloid 7DLGT low borderline
Mtru04G0041930.1 Alkaloid 7DLGT low borderline
Mtru04G0041940.1 Alkaloid 7DLGT low borderline
Mtru04G0041950.1 Alkaloid 7DLGT medium pass
Mtru04G0047470.1 Alkaloid 7DLGT high pass
Mtru04G0049950.1 Alkaloid 7DLGT low borderline
Mtru04G0050130.1 Alkaloid 7DLGT low borderline
Mtru04G0056840.1 Alkaloid 7DLGT low borderline
Mtru04G0062290.1 Alkaloid 7DLGT low borderline
Mtru04G0062310.1 Alkaloid 7DLGT low borderline
Mtru04G0062320.1 Alkaloid 7DLGT low borderline
Mtru04G0062330.1 Alkaloid 7DLGT low borderline
Mtru04G0062340.1 Alkaloid 7DLGT low borderline
Mtru04G0062360.1 Alkaloid 7DLGT low borderline
Mtru04G0065800.1 Alkaloid 7DLGT low borderline
Mtru04G0068680.1 Alkaloid 7DLGT low borderline
Mtru04G0068700.1 Alkaloid 7DLGT low borderline
Mtru05G0000220.1 Alkaloid 7DLGT low borderline
Mtru05G0008660.1 Alkaloid 7DLGT low borderline
Mtru05G0008800.1 Alkaloid 7DLGT low borderline
Mtru05G0010690.1 Alkaloid 7DLGT low borderline
Mtru05G0010690.2 Alkaloid 7DLGT medium pass
Mtru05G0016310.1 Alkaloid 7DLGT low borderline
Mtru05G0017660.1 Alkaloid 7DLGT low borderline
Mtru05G0019010.1 Alkaloid 7DLGT medium pass
Mtru05G0019020.1 Alkaloid 7DLGT medium pass
Mtru05G0019040.1 Alkaloid 7DLGT high pass
Mtru05G0019800.1 Alkaloid 7DLGT low borderline
Mtru05G0021490.1 Alkaloid 7DLGT medium pass
Mtru05G0021510.1 Alkaloid 7DLGT medium pass
Mtru05G0024120.1 Alkaloid 7DLGT low borderline
Mtru05G0024180.1 Alkaloid 7DLGT low borderline
Mtru05G0027480.1 Alkaloid 7DLGT low borderline
Mtru05G0027490.1 Alkaloid 7DLGT low borderline
Mtru05G0031270.1 Alkaloid 7DLGT medium pass
Mtru05G0034110.1 Alkaloid 7DLGT medium pass