PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru04G0059360.1 Steroid CPD/CYP90A1 medium borderline
Mtru05G0005570.1 Steroid CPD/CYP90A1 low borderline
Mtru05G0005570.2 Steroid CPD/CYP90A1 low borderline
Mtru05G0005570.3 Steroid CPD/CYP90A1 low borderline
Mtru05G0052900.1 Steroid CPD/CYP90A1 medium borderline
Mtru06G0010270.1 Steroid CPD/CYP90A1 low borderline
Mtru06G0027110.1 Steroid CPD/CYP90A1 low borderline
Mtru06G0034090.1 Steroid CPD/CYP90A1 low borderline
Mtru07G0012570.1 Steroid CPD/CYP90A1 low borderline
Mtru08G0005230.1 Steroid CPD/CYP90A1 low borderline
Mtru08G0039320.1 Steroid CPD/CYP90A1 low borderline
Mtru08G0045420.1 Steroid CPD/CYP90A1 low borderline
Mtruscaffold00450006390.2 Steroid CPD/CYP90A1 medium borderline
Mtruscaffold00450006400.1 Steroid CPD/CYP90A1 medium borderline
Mtruscaffold00450006400.2 Steroid CPD/CYP90A1 medium borderline
Mtruscaffold04570017830.1 Steroid CPD/CYP90A1 medium borderline
Mtru01G0020580.1 Steroid CPI1 low borderline
Mtru03G0037950.1 Steroid CPI1 high pass
Mtru03G0037950.2 Steroid CPI1 high pass
Mtru01G0058640.1 Steroid CYP51G1 medium borderline
Mtru01G0061020.1 Steroid CYP51G1 medium borderline
Mtru01G0061030.1 Steroid CYP51G1 medium borderline
Mtru02G0034720.1 Steroid CYP51G1 medium borderline
Mtru03G0009120.1 Steroid CYP51G1 medium borderline
Mtru03G0009140.1 Steroid CYP51G1 medium borderline
Mtru03G0023690.1 Steroid CYP51G1 medium borderline
Mtru03G0023850.1 Steroid CYP51G1 medium borderline
Mtru03G0023890.1 Steroid CYP51G1 medium borderline
Mtru03G0023990.1 Steroid CYP51G1 medium borderline
Mtru03G0066400.1 Steroid CYP51G1 low borderline
Mtru04G0020190.1 Steroid CYP51G1 medium borderline
Mtru04G0027560.1 Steroid CYP51G1 medium borderline
Mtru04G0033150.1 Steroid CYP51G1 medium borderline
Mtru04G0044950.1 Steroid CYP51G1 medium borderline
Mtru04G0054660.1 Steroid CYP51G1 medium borderline
Mtru04G0054680.1 Steroid CYP51G1 medium borderline
Mtru04G0054700.1 Steroid CYP51G1 medium borderline
Mtru04G0054730.1 Steroid CYP51G1 medium borderline
Mtru05G0012010.1 Steroid CYP51G1 medium borderline
Mtru05G0039870.1 Steroid CYP51G1 medium borderline
Mtru05G0054700.1 Steroid CYP51G1 medium borderline
Mtru06G0031000.1 Steroid CYP51G1 low borderline
Mtru08G0000750.1 Steroid CYP51G1 medium borderline
Mtru08G0000770.1 Steroid CYP51G1 medium borderline
Mtru08G0027930.1 Steroid CYP51G1 medium borderline
Mtru08G0039260.1 Steroid CYP51G1 medium borderline
Mtru08G0055300.1 Steroid CYP51G1 low borderline
Mtruscaffold01710012240.1 Steroid CYP51G1 medium borderline
Mtruscaffold17500024550.1 Steroid CYP51G1 medium borderline
Mtru01G0005220.2 Steroid CYP90D1 low borderline