PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Oglu03G0023170.1 Alkaloid H6H medium borderline
Oglu03G0030090.1 Alkaloid H6H medium borderline
Oglu03G0040910.1 Alkaloid H6H medium borderline
Oglu04G0011050.1 Alkaloid H6H low borderline
Oglu04G0011050.2 Alkaloid H6H low borderline
Oglu04G0027930.1 Alkaloid H6H medium borderline
Oglu05G0017710.3 Alkaloid H6H medium borderline
Oglu05G0023620.1 Alkaloid H6H low borderline
Oglu05G0027980.1 Alkaloid H6H low borderline
Oglu06G0012290.1 Alkaloid H6H low borderline
Oglu07G0000290.1 Alkaloid H6H medium pass
Oglu07G0003820.1 Alkaloid H6H medium borderline
Oglu07G0003830.1 Alkaloid H6H medium pass
Oglu08G0015170.1 Alkaloid H6H low borderline
Oglu09G0002340.1 Alkaloid H6H low borderline
Oglu09G0002490.1 Alkaloid H6H low borderline
Oglu09G0002490.2 Alkaloid H6H low borderline
Oglu09G0002490.3 Alkaloid H6H low borderline
Oglu09G0002490.4 Alkaloid H6H low borderline
Oglu09G0012610.1 Alkaloid H6H medium borderline
Oglu10G0005130.1 Alkaloid H6H low borderline
Oglu10G0005130.2 Alkaloid H6H low borderline
Oglu10G0016730.1 Alkaloid H6H low borderline
Oglu10G0016740.1 Alkaloid H6H medium borderline
Oglu10G0018170.1 Alkaloid H6H medium borderline
Oglu11G0005160.1 Alkaloid H6H medium pass
Oglu11G0011700.1 Alkaloid H6H medium borderline
Oglu12G0018770.1 Alkaloid H6H medium borderline
Oglu01G0009130.1 Alkaloid IO medium borderline
Oglu01G0009150.1 Alkaloid IO medium borderline
Oglu01G0010320.1 Alkaloid IO medium borderline
Oglu01G0038860.1 Alkaloid IO medium borderline
Oglu02G0008980.1 Alkaloid IO low borderline
Oglu02G0017570.1 Alkaloid IO medium borderline
Oglu02G0027860.1 Alkaloid IO low borderline
Oglu03G0027110.1 Alkaloid IO medium borderline
Oglu03G0028020.1 Alkaloid IO medium borderline
Oglu03G0034010.1 Alkaloid IO medium borderline
Oglu03G0034280.1 Alkaloid IO medium borderline
Oglu03G0034280.2 Alkaloid IO medium borderline
Oglu04G0004480.1 Alkaloid IO medium borderline
Oglu04G0011060.1 Alkaloid IO medium borderline
Oglu05G0010280.1 Alkaloid IO medium borderline
Oglu05G0023680.1 Alkaloid IO medium borderline
Oglu06G0006940.1 Alkaloid IO medium borderline
Oglu06G0023170.1 Alkaloid IO medium borderline
Oglu07G0015870.3 Alkaloid IO low borderline
Oglu08G0002050.1 Alkaloid IO medium borderline
Oglu08G0023580.1 Alkaloid IO medium borderline
Oglu09G0003330.1 Alkaloid IO medium borderline