PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Oglu08G0014290.1 Alkaloid NMT low borderline
Oglu08G0014310.1 Alkaloid NMT low borderline
Oglu08G0014310.2 Alkaloid NMT low borderline
Oglu08G0014320.1 Alkaloid NMT low borderline
Oglu08G0014320.2 Alkaloid NMT low borderline
Oglu08G0014320.3 Alkaloid NMT low borderline
Oglu08G0016740.1 Alkaloid NMT low borderline
Oglu08G0016740.2 Alkaloid NMT low borderline
Oglu08G0016740.3 Alkaloid NMT low borderline
Oglu08G0025100.1 Alkaloid NMT medium pass
Oglu09G0001970.1 Alkaloid NMT medium pass
Oglu09G0001970.2 Alkaloid NMT medium pass
Oglu09G0001970.3 Alkaloid NMT medium pass
Oglu09G0001970.4 Alkaloid NMT medium pass
Oglu09G0001970.5 Alkaloid NMT medium pass
Oglu09G0001970.6 Alkaloid NMT medium pass
Oglu09G0001970.7 Alkaloid NMT medium pass
Oglu09G0001970.8 Alkaloid NMT medium pass
Oglu09G0005470.1 Alkaloid NMT low borderline
Oglu09G0005470.2 Alkaloid NMT low borderline
Oglu09G0007530.1 Alkaloid NMT medium pass
Oglu09G0007530.2 Alkaloid NMT medium pass
Oglu09G0007670.1 Alkaloid NMT low borderline
Oglu09G0009980.1 Alkaloid NMT low borderline
Oglu09G0010170.1 Alkaloid NMT medium pass
Oglu09G0019720.1 Alkaloid NMT low borderline
Oglu10G0013640.1 Alkaloid NMT medium borderline
Oglu11G0018230.1 Alkaloid NMT medium pass
Oglu11G0018230.2 Alkaloid NMT medium pass
Oglu12G0002220.1 Alkaloid NMT medium pass
Oglu12G0006460.1 Alkaloid NMT medium borderline
Oglu12G0020010.1 Alkaloid NMT low borderline
Oglu02G0016820.1 Alkaloid ODC medium pass
Oglu08G0008470.1 Alkaloid ODC low borderline
Oglu09G0000370.1 Alkaloid ODC medium pass
Oglu09G0018590.1 Alkaloid ODC medium pass
Oglu01G0000380.1 Alkaloid PMT low borderline
Oglu01G0005550.1 Alkaloid PMT medium pass
Oglu01G0006020.1 Alkaloid PMT medium pass
Oglu01G0016500.1 Alkaloid PMT medium pass
Oglu01G0026070.1 Alkaloid PMT medium pass
Oglu01G0026080.1 Alkaloid PMT medium pass
Oglu02G0010090.1 Alkaloid PMT medium pass
Oglu02G0010710.1 Alkaloid PMT medium borderline
Oglu02G0010710.2 Alkaloid PMT medium borderline
Oglu03G0030390.1 Alkaloid PMT low borderline
Oglu04G0002280.1 Alkaloid PMT medium pass
Oglu04G0003070.1 Alkaloid PMT medium pass
Oglu04G0017380.1 Alkaloid PMT low borderline
Oglu04G0017380.2 Alkaloid PMT low borderline