PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Oglu03G0040390.2 Alkaloid T3O medium borderline
Oglu04G0000030.1 Alkaloid T3O medium borderline
Oglu04G0002450.1 Alkaloid T3O medium borderline
Oglu04G0002540.1 Alkaloid T3O medium borderline
Oglu04G0015860.1 Alkaloid T3O medium borderline
Oglu04G0019750.1 Alkaloid T3O medium borderline
Oglu04G0021160.1 Alkaloid T3O low borderline
Oglu04G0021770.1 Alkaloid T3O medium pass
Oglu05G0000150.1 Alkaloid T3O low borderline
Oglu05G0005240.1 Alkaloid T3O medium pass
Oglu05G0006620.1 Alkaloid T3O medium pass
Oglu05G0007310.1 Alkaloid T3O medium pass
Oglu05G0015300.1 Alkaloid T3O low borderline
Oglu05G0017840.1 Alkaloid T3O medium borderline
Oglu05G0019130.1 Alkaloid T3O low borderline
Oglu05G0022280.1 Alkaloid T3O medium borderline
Oglu06G0000050.1 Alkaloid T3O medium borderline
Oglu06G0000530.1 Alkaloid T3O medium pass
Oglu06G0013790.1 Alkaloid T3O medium borderline
Oglu06G0013970.1 Alkaloid T3O medium borderline
Oglu06G0014930.1 Alkaloid T3O medium borderline
Oglu06G0016630.1 Alkaloid T3O medium borderline
Oglu06G0016630.2 Alkaloid T3O medium borderline
Oglu06G0019640.1 Alkaloid T3O medium pass
Oglu06G0021780.1 Alkaloid T3O medium borderline
Oglu06G0023130.1 Alkaloid T3O medium borderline
Oglu06G0023140.1 Alkaloid T3O medium borderline
Oglu06G0023150.1 Alkaloid T3O medium borderline
Oglu06G0023150.2 Alkaloid T3O medium borderline
Oglu06G0023190.1 Alkaloid T3O medium borderline
Oglu06G0023200.1 Alkaloid T3O medium borderline
Oglu06G0025240.1 Alkaloid T3O medium borderline
Oglu06G0025850.1 Alkaloid T3O medium pass
Oglu07G0006940.1 Alkaloid T3O medium borderline
Oglu07G0009540.1 Alkaloid T3O medium borderline
Oglu07G0012490.1 Alkaloid T3O medium pass
Oglu07G0013750.1 Alkaloid T3O medium pass
Oglu07G0015870.1 Alkaloid T3O medium pass
Oglu07G0015870.2 Alkaloid T3O medium pass
Oglu07G0015880.1 Alkaloid T3O medium pass
Oglu07G0015890.1 Alkaloid T3O low borderline
Oglu07G0015890.2 Alkaloid T3O medium pass
Oglu07G0015890.3 Alkaloid T3O low borderline
Oglu07G0015890.4 Alkaloid T3O low borderline
Oglu07G0015890.5 Alkaloid T3O medium pass
Oglu07G0015910.1 Alkaloid T3O medium pass
Oglu07G0015910.2 Alkaloid T3O medium pass
Oglu07G0015920.1 Alkaloid T3O medium pass
Oglu07G0021030.1 Alkaloid T3O medium borderline
Oglu08G0000460.1 Alkaloid T3O medium borderline